Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 AC092364.2-201ENST00000596710 2692 ntBASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 MIR4453-201ENST00000584019 89 ntBASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 TUBB3P1-201ENST00000405796 1332 ntBASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 AC006449.5-201ENST00000610658 2098 ntBASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
TRAM1L1Q8N609 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 FAM86GP-201ENST00000448322 971 ntBASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.11■□□□□ 0.17
TRAM1L1Q8N609 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAM1L1Q8N609 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms