Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 MTDHP5-201ENST00000598980 586 ntBASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 C20orf181-201ENST00000623918 480 ntBASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 BSG-215ENST00000618006 1329 ntTSL 2 BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CCDC65Q8IXS2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 YBX2P1-201ENST00000394192 760 ntBASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 TFAMP1-201ENST00000412727 736 ntBASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC65Q8IXS2 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 AL135744.1-201ENST00000565098 629 ntBASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 PCDHA1-201ENST00000378133 2726 ntBASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC65Q8IXS2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC65Q8IXS2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC65Q8IXS2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC65Q8IXS2 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC65Q8IXS2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC65Q8IXS2 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC65Q8IXS2 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms