Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 KRT8P19-201ENST00000551916 1455 ntBASIC22.75■■□□□ 1.23
UBR1Q8IWV7 AC006001.1-201ENST00000325130 474 ntBASIC22.75■■□□□ 1.23
UBR1Q8IWV7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 CNN2P10-201ENST00000443067 918 ntBASIC22.75■■□□□ 1.23
UBR1Q8IWV7 EIF4HP1-201ENST00000453115 687 ntBASIC22.75■■□□□ 1.23
UBR1Q8IWV7 ADM-202ENST00000524948 584 ntTSL 2 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 AC079328.1-201ENST00000560358 952 ntBASIC22.75■■□□□ 1.23
UBR1Q8IWV7 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 MIR4741-201ENST00000579822 90 ntBASIC22.75■■□□□ 1.23
UBR1Q8IWV7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 AL096828.3-201ENST00000615354 462 ntBASIC22.75■■□□□ 1.23
UBR1Q8IWV7 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
UBR1Q8IWV7 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 RPSAP36-202ENST00000494591 1261 ntBASIC22.74■■□□□ 1.23
UBR1Q8IWV7 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 CD276-203ENST00000537340 2439 ntTSL 2 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 HINT2P1-201ENST00000419438 481 ntBASIC22.74■■□□□ 1.23
UBR1Q8IWV7 FAM197Y7-201ENST00000432892 766 ntBASIC22.74■■□□□ 1.23
UBR1Q8IWV7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 APOA2-204ENST00000464492 530 ntTSL 3 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 ACR-203ENST00000529621 708 ntTSL 5 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 NAT9-224ENST00000583757 583 ntTSL 3 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 AL138709.1-201ENST00000614840 1693 ntBASIC22.74■■□□□ 1.23
UBR1Q8IWV7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
UBR1Q8IWV7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 HLA-A-202ENST00000376806 1854 ntBASIC22.73■■□□□ 1.23
UBR1Q8IWV7 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 EEF1DP1-201ENST00000585891 896 ntBASIC22.73■■□□□ 1.23
UBR1Q8IWV7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
UBR1Q8IWV7 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 ZBTB45P2-201ENST00000452245 1531 ntBASIC22.72■■□□□ 1.23
UBR1Q8IWV7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 BTBD6P1-201ENST00000412176 1267 ntBASIC22.72■■□□□ 1.23
UBR1Q8IWV7 AKR7A2P1-201ENST00000460134 915 ntBASIC22.72■■□□□ 1.23
UBR1Q8IWV7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
UBR1Q8IWV7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms