Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 AP001269.4-201ENST00000609611 512 ntBASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 AC020765.3-201ENST00000613051 740 ntBASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 AL589182.2-201ENST00000619332 1049 ntBASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 AF228730.7-201ENST00000641842 219 ntBASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 SLC22A20-204ENST00000530038 1673 ntBASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NUDCD3Q8IVD9 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 AP003680.1-201ENST00000598970 3660 ntBASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 AC012615.1-201ENST00000565797 1299 ntBASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 NKAPP1-205ENST00000585790 367 ntBASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NUDCD3Q8IVD9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 PI4KAP1-204ENST00000612579 1703 ntBASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 AC016027.1-202ENST00000607927 1699 ntBASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 AC006058.4-201ENST00000624016 1670 ntBASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 AL353732.1-201ENST00000569618 1459 ntBASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 TMPOP1-202ENST00000424642 1267 ntBASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 AC132008.2-207ENST00000454517 770 ntBASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 AP001350.2-201ENST00000625104 1094 ntBASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUDCD3Q8IVD9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms