Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 CDC14C-201ENST00000428251 1719 ntBASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
NPAS4Q8IUM7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 AC008735.3-201ENST00000596646 500 ntBASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NPAS4Q8IUM7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 AC105020.1-201ENST00000435356 2205 ntBASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 AC004987.2-201ENST00000395959 1148 ntBASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 RPL28-206ENST00000558752 671 ntTSL 3 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 AP005482.1-201ENST00000563722 1273 ntBASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
NPAS4Q8IUM7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 BOLA2P3-201ENST00000404566 256 ntBASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 EEF1DP4-201ENST00000446006 880 ntBASIC17.35■□□□□ 0.37
NPAS4Q8IUM7 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms