Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 AC008550.1-201ENST00000511500 884 ntBASIC13.67□□□□□ -0.22
ZNF546Q86UE3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 CICP14-201ENST00000629111 2732 ntBASIC13.67□□□□□ -0.22
ZNF546Q86UE3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ZNF546Q86UE3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 AC126335.2-201ENST00000623362 4637 ntBASIC13.66□□□□□ -0.22
ZNF546Q86UE3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 AL671710.1-201ENST00000610245 2349 ntBASIC13.66□□□□□ -0.22
ZNF546Q86UE3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 AL355075.4-201ENST00000554988 638 ntBASIC13.66□□□□□ -0.22
ZNF546Q86UE3 DUX4L17-201ENST00000557360 1267 ntBASIC13.66□□□□□ -0.22
ZNF546Q86UE3 STK25P1-201ENST00000585406 838 ntBASIC13.66□□□□□ -0.22
ZNF546Q86UE3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 AC013467.2-201ENST00000605472 835 ntBASIC13.66□□□□□ -0.22
ZNF546Q86UE3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.66□□□□□ -0.22
ZNF546Q86UE3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF546Q86UE3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF546Q86UE3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ZNF546Q86UE3 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF546Q86UE3 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ZNF546Q86UE3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ZNF546Q86UE3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms