Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 IGLL3P-201ENST00000412472 434 ntBASIC14.95□□□□□ -0.02
NIPAL3Q6P499 FAM185BP-201ENST00000443595 716 ntBASIC14.95□□□□□ -0.02
NIPAL3Q6P499 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 ACTL9-202ENST00000612068 1252 ntBASIC14.95□□□□□ -0.02
NIPAL3Q6P499 AP001350.2-201ENST00000625104 1094 ntBASIC14.95□□□□□ -0.02
NIPAL3Q6P499 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.95□□□□□ -0.02
NIPAL3Q6P499 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
NIPAL3Q6P499 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.94□□□□□ -0.02
NIPAL3Q6P499 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 MED15P5-201ENST00000423150 992 ntBASIC14.94□□□□□ -0.02
NIPAL3Q6P499 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 AC087641.1-201ENST00000557561 1021 ntBASIC14.94□□□□□ -0.02
NIPAL3Q6P499 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 AC010507.1-201ENST00000633895 436 ntBASIC14.94□□□□□ -0.02
NIPAL3Q6P499 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14.94□□□□□ -0.02
NIPAL3Q6P499 SLC22A20-204ENST00000530038 1673 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 AC092384.3-202ENST00000564646 2873 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 MIR940-201ENST00000401276 94 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 HCG4-201ENST00000418983 998 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 POU5F1P6-201ENST00000466990 990 ntBASIC14.93□□□□□ -0.02
NIPAL3Q6P499 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
NIPAL3Q6P499 RNA5SP416-201ENST00000516838 111 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms