Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
TRNP1Q6NT89 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.97■□□□□ 0.31
TRNP1Q6NT89 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRNP1Q6NT89 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRNP1Q6NT89 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.97■□□□□ 0.31
TRNP1Q6NT89 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.97■□□□□ 0.31
TRNP1Q6NT89 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRNP1Q6NT89 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRNP1Q6NT89 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 AC254562.1-201ENST00000417586 456 ntBASIC16.96■□□□□ 0.31
TRNP1Q6NT89 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 KRT18P32-201ENST00000424695 1287 ntBASIC16.96■□□□□ 0.31
TRNP1Q6NT89 SPDYE14P-201ENST00000442619 822 ntBASIC16.96■□□□□ 0.31
TRNP1Q6NT89 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 AC004835.2-201ENST00000603762 682 ntBASIC16.96■□□□□ 0.31
TRNP1Q6NT89 AC009093.7-201ENST00000623853 1223 ntBASIC16.96■□□□□ 0.31
TRNP1Q6NT89 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRNP1Q6NT89 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRNP1Q6NT89 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.96■□□□□ 0.3
TRNP1Q6NT89 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
TRNP1Q6NT89 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRNP1Q6NT89 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRNP1Q6NT89 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.96■□□□□ 0.3
TRNP1Q6NT89 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TRNP1Q6NT89 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TRNP1Q6NT89 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 CNN2P11-201ENST00000429351 262 ntBASIC16.95■□□□□ 0.3
TRNP1Q6NT89 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 RNA5SP410-201ENST00000516285 106 ntBASIC16.95■□□□□ 0.3
TRNP1Q6NT89 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 ALG1L8P-201ENST00000533887 760 ntBASIC16.95■□□□□ 0.3
TRNP1Q6NT89 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 RARRES2P9-201ENST00000565168 469 ntBASIC16.95■□□□□ 0.3
TRNP1Q6NT89 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRNP1Q6NT89 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.94■□□□□ 0.3
TRNP1Q6NT89 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRNP1Q6NT89 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRNP1Q6NT89 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms