Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
LYSMD4Q5XG99 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 U82695.1-201ENST00000635752 1889 ntBASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 KRT8P22-201ENST00000562317 1415 ntBASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
LYSMD4Q5XG99 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 AC005622.1-201ENST00000636801 1703 ntBASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 AL133338.1-201ENST00000565695 1517 ntBASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 ACTBP11-201ENST00000436287 1126 ntBASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 KLF2P4-201ENST00000451959 1225 ntBASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 CTBP2P5-201ENST00000454986 1264 ntBASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 SLC25A47P1-201ENST00000531577 414 ntBASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 MIR4538-201ENST00000581377 78 ntBASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 AC133539.2-201ENST00000604757 467 ntBASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 CU634019.7-201ENST00000624153 1185 ntBASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 FP236241.2-201ENST00000624906 1185 ntBASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.91■□□□□ 0.14
LYSMD4Q5XG99 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 Z97205.2-201ENST00000564697 1639 ntBASIC15.9■□□□□ 0.14
LYSMD4Q5XG99 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms