Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN20Q4JDL3 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.21■□□□□ 0.34
PTPN20Q4JDL3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
PTPN20Q4JDL3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 MIR346-201ENST00000362234 95 ntBASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 MIR3687-2-201ENST00000577708 61 ntBASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 MIR3687-1-201ENST00000614492 61 ntBASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 AL513210.1-201ENST00000629608 234 ntBASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 AC008741.2-201ENST00000612792 3115 ntBASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.2■□□□□ 0.34
PTPN20Q4JDL3 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 AC010491.1-201ENST00000563101 2797 ntBASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 AL592309.1-201ENST00000443127 649 ntBASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 AC098859.1-201ENST00000502915 1238 ntBASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 SPTSSB-204ENST00000617024 1292 ntBASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PTPN20Q4JDL3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.18■□□□□ 0.34
PTPN20Q4JDL3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms