Protein–RNA interactions for Protein: Q15042

RAB3GAP1, Rab3 GTPase-activating protein catalytic subunit, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1Q15042 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB3GAP1Q15042 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RAB3GAP1Q15042 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
RAB3GAP1Q15042 AC012569.1-201ENST00000591191 1524 ntBASIC19.91■□□□□ 0.78
RAB3GAP1Q15042 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.91■□□□□ 0.78
RAB3GAP1Q15042 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RAB3GAP1Q15042 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC19.91■□□□□ 0.78
RAB3GAP1Q15042 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 SPDYE11-202ENST00000450699 704 ntBASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 AC023141.5-201ENST00000458585 616 ntBASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 SPDYE9P-201ENST00000570642 692 ntBASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 SPDYE10P-202ENST00000612005 668 ntBASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 SPDYE8P-202ENST00000612377 668 ntBASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 AC023824.1-201ENST00000562945 2975 ntBASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RAB3GAP1Q15042 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
RAB3GAP1Q15042 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 MYB-201ENST00000316528 3571 ntTSL 5 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 FAM86C2P-203ENST00000528684 1004 ntBASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 MYB-241ENST00000616088 3573 ntTSL 5 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.89■□□□□ 0.77
RAB3GAP1Q15042 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 CBR1-202ENST00000399191 838 ntTSL 3 BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 HLA-J-203ENST00000494367 1087 ntBASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 AC109322.1-201ENST00000524499 1264 ntBASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
RAB3GAP1Q15042 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms