Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CDH17Q12864 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH17Q12864 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDH17Q12864 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH17Q12864 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
CDH17Q12864 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.55■□□□□ 0.24
CDH17Q12864 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH17Q12864 SLC25A1P1-201ENST00000528351 927 ntBASIC16.55■□□□□ 0.24
CDH17Q12864 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
CDH17Q12864 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
CDH17Q12864 AC027601.4-201ENST00000611259 610 ntBASIC16.55■□□□□ 0.24
CDH17Q12864 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
CDH17Q12864 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH17Q12864 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH17Q12864 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH17Q12864 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CDH17Q12864 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.55■□□□□ 0.24
CDH17Q12864 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CDH17Q12864 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.55■□□□□ 0.24
CDH17Q12864 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 WASH6P-202ENST00000359512 1437 ntBASIC16.54■□□□□ 0.24
CDH17Q12864 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH17Q12864 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.54■□□□□ 0.24
CDH17Q12864 AC010491.1-201ENST00000563101 2797 ntBASIC16.54■□□□□ 0.24
CDH17Q12864 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 AC002056.1-201ENST00000395613 760 ntBASIC16.54■□□□□ 0.24
CDH17Q12864 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.54■□□□□ 0.24
CDH17Q12864 MED15P5-201ENST00000423150 992 ntBASIC16.54■□□□□ 0.24
CDH17Q12864 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.54■□□□□ 0.24
CDH17Q12864 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH17Q12864 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.54■□□□□ 0.24
CDH17Q12864 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH17Q12864 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.54■□□□□ 0.24
CDH17Q12864 AC140113.2-201ENST00000604370 208 ntBASIC16.54■□□□□ 0.24
CDH17Q12864 FAM197Y3-203ENST00000618346 717 ntBASIC16.54■□□□□ 0.24
CDH17Q12864 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.54■□□□□ 0.24
CDH17Q12864 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CDH17Q12864 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CDH17Q12864 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
CDH17Q12864 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
CDH17Q12864 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CDH17Q12864 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CDH17Q12864 AC073439.1-201ENST00000624121 1774 ntBASIC16.54■□□□□ 0.24
CDH17Q12864 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH17Q12864 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CDH17Q12864 CDC14C-201ENST00000428251 1719 ntBASIC16.53■□□□□ 0.24
CDH17Q12864 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.53■□□□□ 0.24
CDH17Q12864 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC16.53■□□□□ 0.24
CDH17Q12864 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CDH17Q12864 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CDH17Q12864 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 KRT18P3-201ENST00000451602 1288 ntBASIC16.53■□□□□ 0.24
CDH17Q12864 LINC02447-202ENST00000501888 2146 ntBASIC16.53■□□□□ 0.24
CDH17Q12864 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 AC112191.1-201ENST00000523689 701 ntBASIC16.53■□□□□ 0.24
CDH17Q12864 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.53■□□□□ 0.24
CDH17Q12864 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH17Q12864 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.53■□□□□ 0.24
CDH17Q12864 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CDH17Q12864 AL513190.1-201ENST00000621254 727 ntBASIC16.53■□□□□ 0.24
CDH17Q12864 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms