Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC131009.4-201ENST00000624048 1740 ntBASIC14.49□□□□□ -0.09
NKX6-1P78426 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
NKX6-1P78426 TUBB3P1-201ENST00000405796 1332 ntBASIC14.49□□□□□ -0.09
NKX6-1P78426 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 KRT18P32-201ENST00000424695 1287 ntBASIC14.49□□□□□ -0.09
NKX6-1P78426 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.49□□□□□ -0.09
NKX6-1P78426 AC140658.5-201ENST00000438532 169 ntBASIC14.49□□□□□ -0.09
NKX6-1P78426 AC002472.2-201ENST00000442739 958 ntBASIC14.49□□□□□ -0.09
NKX6-1P78426 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 KRT8P48-201ENST00000515599 1220 ntBASIC14.49□□□□□ -0.09
NKX6-1P78426 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 MIR4492-201ENST00000581627 80 ntBASIC14.49□□□□□ -0.09
NKX6-1P78426 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 UBALD1-205ENST00000590891 2641 ntBASIC14.49□□□□□ -0.09
NKX6-1P78426 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.49□□□□□ -0.09
NKX6-1P78426 AC092068.3-201ENST00000587894 2016 ntBASIC14.49□□□□□ -0.09
NKX6-1P78426 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
NKX6-1P78426 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.49□□□□□ -0.09
NKX6-1P78426 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
NKX6-1P78426 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
NKX6-1P78426 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX6-1P78426 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX6-1P78426 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX6-1P78426 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX6-1P78426 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX6-1P78426 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX6-1P78426 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX6-1P78426 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.48□□□□□ -0.09
NKX6-1P78426 KLF2P3-201ENST00000451977 1087 ntBASIC14.48□□□□□ -0.09
NKX6-1P78426 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 HLA-J-202ENST00000469281 1241 ntBASIC14.48□□□□□ -0.09
NKX6-1P78426 RN7SL589P-201ENST00000481268 310 ntBASIC14.48□□□□□ -0.09
NKX6-1P78426 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.48□□□□□ -0.09
NKX6-1P78426 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
NKX6-1P78426 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.48□□□□□ -0.09
NKX6-1P78426 RN7SL204P-201ENST00000582831 262 ntBASIC14.48□□□□□ -0.09
NKX6-1P78426 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX6-1P78426 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.48□□□□□ -0.09
NKX6-1P78426 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
NKX6-1P78426 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms