Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.42□□□□□ -0.26
SPCS3P61009 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS3P61009 AL603832.2-201ENST00000566195 2125 ntBASIC13.42□□□□□ -0.26
SPCS3P61009 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS3P61009 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SPCS3P61009 AL023775.1-201ENST00000454907 1746 ntBASIC13.42□□□□□ -0.26
SPCS3P61009 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.41□□□□□ -0.26
SPCS3P61009 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.41□□□□□ -0.26
SPCS3P61009 AL031731.1-201ENST00000642131 2094 ntBASIC13.41□□□□□ -0.26
SPCS3P61009 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.41□□□□□ -0.26
SPCS3P61009 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 MBP-202ENST00000355994 2772 ntTSL 5 BASIC13.41□□□□□ -0.26
SPCS3P61009 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.41□□□□□ -0.26
SPCS3P61009 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
SPCS3P61009 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.41□□□□□ -0.26
SPCS3P61009 AP000867.3-201ENST00000524675 377 ntBASIC13.41□□□□□ -0.26
SPCS3P61009 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.41□□□□□ -0.26
SPCS3P61009 AC012615.1-201ENST00000565797 1299 ntBASIC13.41□□□□□ -0.26
SPCS3P61009 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.41□□□□□ -0.26
SPCS3P61009 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SPCS3P61009 MPDU1-223ENST00000582151 728 ntBASIC13.41□□□□□ -0.26
SPCS3P61009 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.41□□□□□ -0.26
SPCS3P61009 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SPCS3P61009 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
SPCS3P61009 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
SPCS3P61009 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.41□□□□□ -0.26
SPCS3P61009 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.41□□□□□ -0.26
SPCS3P61009 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SPCS3P61009 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.41□□□□□ -0.26
SPCS3P61009 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SPCS3P61009 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.4□□□□□ -0.26
SPCS3P61009 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.4□□□□□ -0.26
SPCS3P61009 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.4□□□□□ -0.26
SPCS3P61009 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 AP005117.1-201ENST00000584346 1413 ntBASIC13.4□□□□□ -0.26
SPCS3P61009 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SPCS3P61009 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.4□□□□□ -0.26
SPCS3P61009 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SPCS3P61009 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SPCS3P61009 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 LINC01144-201ENST00000626198 1710 ntBASIC13.4□□□□□ -0.26
SPCS3P61009 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SPCS3P61009 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.4□□□□□ -0.26
SPCS3P61009 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SPCS3P61009 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.4□□□□□ -0.26
SPCS3P61009 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SPCS3P61009 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.4□□□□□ -0.26
SPCS3P61009 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SPCS3P61009 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC13.4□□□□□ -0.26
SPCS3P61009 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SPCS3P61009 MIR4492-201ENST00000581627 80 ntBASIC13.4□□□□□ -0.26
SPCS3P61009 DBP-204ENST00000599385 709 ntTSL 3 BASIC13.4□□□□□ -0.26
SPCS3P61009 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.4□□□□□ -0.26
SPCS3P61009 AL591684.3-201ENST00000605187 298 ntBASIC13.4□□□□□ -0.26
SPCS3P61009 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms