Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 LINC02199-201ENST00000506655 2702 ntBASIC16.54■□□□□ 0.24
WNT3AP56704 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.54■□□□□ 0.24
WNT3AP56704 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.54■□□□□ 0.24
WNT3AP56704 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
WNT3AP56704 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3AP56704 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3AP56704 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
WNT3AP56704 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
WNT3AP56704 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.53■□□□□ 0.24
WNT3AP56704 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.53■□□□□ 0.24
WNT3AP56704 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.53■□□□□ 0.24
WNT3AP56704 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
WNT3AP56704 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
WNT3AP56704 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3AP56704 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3AP56704 DNAJB3-201ENST00000446806 729 ntBASIC16.53■□□□□ 0.24
WNT3AP56704 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.53■□□□□ 0.24
WNT3AP56704 RN7SL589P-201ENST00000481268 310 ntBASIC16.53■□□□□ 0.24
WNT3AP56704 KRT8P48-201ENST00000515599 1220 ntBASIC16.53■□□□□ 0.24
WNT3AP56704 AC243562.1-201ENST00000560672 389 ntBASIC16.53■□□□□ 0.24
WNT3AP56704 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
WNT3AP56704 AC027307.2-201ENST00000591252 911 ntBASIC16.53■□□□□ 0.24
WNT3AP56704 AC073389.1-201ENST00000595595 795 ntBASIC16.53■□□□□ 0.24
WNT3AP56704 AC026120.1-201ENST00000611536 926 ntBASIC16.53■□□□□ 0.24
WNT3AP56704 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.53■□□□□ 0.24
WNT3AP56704 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.53■□□□□ 0.24
WNT3AP56704 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
WNT3AP56704 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.53■□□□□ 0.24
WNT3AP56704 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
WNT3AP56704 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
WNT3AP56704 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
WNT3AP56704 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.52■□□□□ 0.24
WNT3AP56704 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
WNT3AP56704 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
WNT3AP56704 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.52■□□□□ 0.24
WNT3AP56704 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.52■□□□□ 0.24
WNT3AP56704 SPDYE11-202ENST00000450699 704 ntBASIC16.52■□□□□ 0.24
WNT3AP56704 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
WNT3AP56704 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.52■□□□□ 0.24
WNT3AP56704 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.52■□□□□ 0.24
WNT3AP56704 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.52■□□□□ 0.24
WNT3AP56704 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.52■□□□□ 0.24
WNT3AP56704 AC005829.1-201ENST00000570002 483 ntBASIC16.52■□□□□ 0.24
WNT3AP56704 SPDYE9P-201ENST00000570642 692 ntBASIC16.52■□□□□ 0.24
WNT3AP56704 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
WNT3AP56704 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.52■□□□□ 0.24
WNT3AP56704 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.52■□□□□ 0.24
WNT3AP56704 SPDYE10P-202ENST00000612005 668 ntBASIC16.52■□□□□ 0.24
WNT3AP56704 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
WNT3AP56704 SPDYE8P-202ENST00000612377 668 ntBASIC16.52■□□□□ 0.24
WNT3AP56704 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.52■□□□□ 0.24
WNT3AP56704 AC008267.7-201ENST00000624570 1194 ntBASIC16.52■□□□□ 0.24
WNT3AP56704 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.52■□□□□ 0.24
WNT3AP56704 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
WNT3AP56704 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.52■□□□□ 0.24
WNT3AP56704 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.52■□□□□ 0.24
WNT3AP56704 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.23
WNT3AP56704 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.52■□□□□ 0.23
WNT3AP56704 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms