Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2DP55273 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKN2DP55273 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2DP55273 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.16■□□□□ 0.18
CDKN2DP55273 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2DP55273 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2DP55273 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDKN2DP55273 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.16■□□□□ 0.18
CDKN2DP55273 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.16■□□□□ 0.18
CDKN2DP55273 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.16■□□□□ 0.18
CDKN2DP55273 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2DP55273 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2DP55273 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKN2DP55273 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKN2DP55273 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
CDKN2DP55273 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CDKN2DP55273 AP005117.1-202ENST00000581724 1908 ntBASIC16.15■□□□□ 0.18
CDKN2DP55273 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDKN2DP55273 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 WASH6P-202ENST00000359512 1437 ntBASIC16.15■□□□□ 0.18
CDKN2DP55273 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDKN2DP55273 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
CDKN2DP55273 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDKN2DP55273 AC026396.1-201ENST00000419388 421 ntBASIC16.15■□□□□ 0.18
CDKN2DP55273 MED15P5-201ENST00000423150 992 ntBASIC16.15■□□□□ 0.18
CDKN2DP55273 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.15■□□□□ 0.18
CDKN2DP55273 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CDKN2DP55273 RNA5SP416-201ENST00000516838 111 ntBASIC16.15■□□□□ 0.18
CDKN2DP55273 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKN2DP55273 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.15■□□□□ 0.18
CDKN2DP55273 AC099522.2-201ENST00000607001 744 ntBASIC16.15■□□□□ 0.18
CDKN2DP55273 AC027601.4-201ENST00000611259 610 ntBASIC16.15■□□□□ 0.18
CDKN2DP55273 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDKN2DP55273 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CDKN2DP55273 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
CDKN2DP55273 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDKN2DP55273 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.15■□□□□ 0.18
CDKN2DP55273 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDKN2DP55273 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.15■□□□□ 0.18
CDKN2DP55273 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKN2DP55273 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDKN2DP55273 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDKN2DP55273 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
CDKN2DP55273 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDKN2DP55273 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDKN2DP55273 AC008677.1-201ENST00000519230 1561 ntBASIC16.14■□□□□ 0.17
CDKN2DP55273 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms