Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 RNU6-1176P-201ENST00000390955 107 ntBASIC16.32■□□□□ 0.2
NUBP1P53384 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NUBP1P53384 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
NUBP1P53384 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.32■□□□□ 0.2
NUBP1P53384 SETP8-201ENST00000435341 628 ntBASIC16.32■□□□□ 0.2
NUBP1P53384 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.32■□□□□ 0.2
NUBP1P53384 AL360268.1-201ENST00000453870 765 ntTSL 3 BASIC16.32■□□□□ 0.2
NUBP1P53384 AL139010.1-201ENST00000454878 894 ntBASIC16.32■□□□□ 0.2
NUBP1P53384 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC16.32■□□□□ 0.2
NUBP1P53384 AP001889.1-201ENST00000525414 633 ntBASIC16.32■□□□□ 0.2
NUBP1P53384 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC16.32■□□□□ 0.2
NUBP1P53384 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC16.32■□□□□ 0.2
NUBP1P53384 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.32■□□□□ 0.2
NUBP1P53384 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC16.32■□□□□ 0.2
NUBP1P53384 ZEB2P1-202ENST00000572816 902 ntTSL 5 BASIC16.32■□□□□ 0.2
NUBP1P53384 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.32■□□□□ 0.2
NUBP1P53384 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.32■□□□□ 0.2
NUBP1P53384 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
NUBP1P53384 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.32■□□□□ 0.2
NUBP1P53384 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.32■□□□□ 0.2
NUBP1P53384 AL021578.1-201ENST00000613646 709 ntBASIC16.32■□□□□ 0.2
NUBP1P53384 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NUBP1P53384 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NUBP1P53384 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC16.32■□□□□ 0.2
NUBP1P53384 AC007224.2-201ENST00000625011 510 ntBASIC16.32■□□□□ 0.2
NUBP1P53384 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC16.32■□□□□ 0.2
NUBP1P53384 RHOXF1P1-202ENST00000635473 501 ntBASIC16.32■□□□□ 0.2
NUBP1P53384 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NUBP1P53384 LYSMD4-203ENST00000378904 2122 ntBASIC16.31■□□□□ 0.2
NUBP1P53384 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NUBP1P53384 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NUBP1P53384 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 AF064858.1-201ENST00000417335 1412 ntTSL 5 BASIC16.31■□□□□ 0.2
NUBP1P53384 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 AC016694.1-201ENST00000434179 700 ntBASIC16.31■□□□□ 0.2
NUBP1P53384 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.31■□□□□ 0.2
NUBP1P53384 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.31■□□□□ 0.2
NUBP1P53384 PQLC2L-206ENST00000468043 883 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 AC068587.2-201ENST00000478386 781 ntBASIC16.31■□□□□ 0.2
NUBP1P53384 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 HNRNPA1P5-201ENST00000558213 966 ntBASIC16.31■□□□□ 0.2
NUBP1P53384 AC066613.2-201ENST00000561007 560 ntTSL 4 BASIC16.31■□□□□ 0.2
NUBP1P53384 AC009486.1-201ENST00000569860 813 ntBASIC16.31■□□□□ 0.2
NUBP1P53384 AC061975.2-201ENST00000581722 295 ntBASIC16.31■□□□□ 0.2
NUBP1P53384 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC16.31■□□□□ 0.2
NUBP1P53384 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC16.31■□□□□ 0.2
NUBP1P53384 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.31■□□□□ 0.2
NUBP1P53384 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
NUBP1P53384 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
NUBP1P53384 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.31■□□□□ 0.2
NUBP1P53384 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NUBP1P53384 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NUBP1P53384 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NUBP1P53384 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
NUBP1P53384 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
NUBP1P53384 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms