Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP98P52948 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.03■□□□□ 0.8
NUP98P52948 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.03■□□□□ 0.8
NUP98P52948 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NUP98P52948 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NUP98P52948 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.03■□□□□ 0.8
NUP98P52948 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC20.03■□□□□ 0.8
NUP98P52948 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NUP98P52948 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP98P52948 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUP98P52948 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC20.02■□□□□ 0.8
NUP98P52948 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
NUP98P52948 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP98P52948 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC20.02■□□□□ 0.8
NUP98P52948 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.02■□□□□ 0.8
NUP98P52948 BNIP3P42-201ENST00000454982 569 ntBASIC20.02■□□□□ 0.8
NUP98P52948 FAM86LP-201ENST00000478302 853 ntBASIC20.02■□□□□ 0.8
NUP98P52948 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.02■□□□□ 0.8
NUP98P52948 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC20.02■□□□□ 0.8
NUP98P52948 AC068587.3-201ENST00000526613 355 ntBASIC20.02■□□□□ 0.8
NUP98P52948 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC20.02■□□□□ 0.8
NUP98P52948 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.02■□□□□ 0.8
NUP98P52948 BNIP3P29-201ENST00000598302 571 ntBASIC20.02■□□□□ 0.8
NUP98P52948 AC011447.5-201ENST00000616168 564 ntBASIC20.02■□□□□ 0.8
NUP98P52948 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.02■□□□□ 0.8
NUP98P52948 CU634019.7-201ENST00000624153 1185 ntBASIC20.02■□□□□ 0.8
NUP98P52948 FP236241.2-201ENST00000624906 1185 ntBASIC20.02■□□□□ 0.8
NUP98P52948 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.02■□□□□ 0.8
NUP98P52948 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP98P52948 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NUP98P52948 KRT8P22-201ENST00000562317 1415 ntBASIC20.02■□□□□ 0.8
NUP98P52948 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC20.02■□□□□ 0.8
NUP98P52948 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP98P52948 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC20.02■□□□□ 0.8
NUP98P52948 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP98P52948 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP98P52948 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20.02■□□□□ 0.8
NUP98P52948 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP98P52948 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NUP98P52948 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NUP98P52948 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
NUP98P52948 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
NUP98P52948 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
NUP98P52948 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC20.02■□□□□ 0.79
NUP98P52948 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUP98P52948 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
NUP98P52948 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NUP98P52948 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
NUP98P52948 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
NUP98P52948 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.02■□□□□ 0.79
NUP98P52948 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC20.02■□□□□ 0.79
NUP98P52948 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NUP98P52948 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.02■□□□□ 0.79
NUP98P52948 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC20.02■□□□□ 0.79
NUP98P52948 AC233724.13-201ENST00000598383 410 ntBASIC20.02■□□□□ 0.79
NUP98P52948 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.01■□□□□ 0.79
NUP98P52948 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.01■□□□□ 0.79
NUP98P52948 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20.01■□□□□ 0.79
NUP98P52948 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC20.01■□□□□ 0.79
NUP98P52948 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.01■□□□□ 0.79
NUP98P52948 AC022494.1-201ENST00000466044 728 ntBASIC20.01■□□□□ 0.79
NUP98P52948 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC20.01■□□□□ 0.79
NUP98P52948 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC20.01■□□□□ 0.79
NUP98P52948 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC20.01■□□□□ 0.79
NUP98P52948 AC120045.2-201ENST00000567334 178 ntBASIC20.01■□□□□ 0.79
NUP98P52948 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.01■□□□□ 0.79
NUP98P52948 AL450472.2-201ENST00000603663 1156 ntBASIC20.01■□□□□ 0.79
NUP98P52948 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC20.01■□□□□ 0.79
NUP98P52948 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC20.01■□□□□ 0.79
NUP98P52948 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
NUP98P52948 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NUP98P52948 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NUP98P52948 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NUP98P52948 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC20■□□□□ 0.79
NUP98P52948 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP98P52948 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20■□□□□ 0.79
NUP98P52948 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20■□□□□ 0.79
NUP98P52948 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NUP98P52948 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC20■□□□□ 0.79
NUP98P52948 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
NUP98P52948 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC20■□□□□ 0.79
NUP98P52948 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20■□□□□ 0.79
NUP98P52948 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20■□□□□ 0.79
NUP98P52948 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20■□□□□ 0.79
NUP98P52948 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms