Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 RPL13AP20-201ENST00000459725 609 ntBASIC20.03■□□□□ 0.8
TM4SF1P30408 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.03■□□□□ 0.8
TM4SF1P30408 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC20.03■□□□□ 0.8
TM4SF1P30408 PARP8-218ENST00000513738 596 ntTSL 4 BASIC20.03■□□□□ 0.8
TM4SF1P30408 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
TM4SF1P30408 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.03■□□□□ 0.8
TM4SF1P30408 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC20.03■□□□□ 0.8
TM4SF1P30408 AC244669.2-201ENST00000612320 853 ntBASIC20.03■□□□□ 0.8
TM4SF1P30408 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC20.03■□□□□ 0.8
TM4SF1P30408 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.03■□□□□ 0.8
TM4SF1P30408 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 GGT3P-204ENST00000453783 1664 ntBASIC20.03■□□□□ 0.8
TM4SF1P30408 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TM4SF1P30408 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TM4SF1P30408 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TM4SF1P30408 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TM4SF1P30408 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 SOCS2P1-201ENST00000417727 557 ntBASIC20.02■□□□□ 0.8
TM4SF1P30408 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC20.02■□□□□ 0.8
TM4SF1P30408 AC016694.1-201ENST00000434179 700 ntBASIC20.02■□□□□ 0.8
TM4SF1P30408 AC012441.1-201ENST00000446669 685 ntBASIC20.02■□□□□ 0.8
TM4SF1P30408 AL355864.2-201ENST00000447420 863 ntBASIC20.02■□□□□ 0.8
TM4SF1P30408 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
TM4SF1P30408 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC20.02■□□□□ 0.8
TM4SF1P30408 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.02■□□□□ 0.8
TM4SF1P30408 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC20.02■□□□□ 0.8
TM4SF1P30408 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC20.02■□□□□ 0.8
TM4SF1P30408 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.02■□□□□ 0.8
TM4SF1P30408 DUX4L45-201ENST00000566406 1057 ntBASIC20.02■□□□□ 0.8
TM4SF1P30408 AC120045.2-201ENST00000567334 178 ntBASIC20.02■□□□□ 0.8
TM4SF1P30408 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC20.02■□□□□ 0.8
TM4SF1P30408 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TM4SF1P30408 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.02■□□□□ 0.8
TM4SF1P30408 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TM4SF1P30408 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TM4SF1P30408 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC20.02■□□□□ 0.79
TM4SF1P30408 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
TM4SF1P30408 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
TM4SF1P30408 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC20.02■□□□□ 0.79
TM4SF1P30408 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TM4SF1P30408 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC20.02■□□□□ 0.79
TM4SF1P30408 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.01■□□□□ 0.79
TM4SF1P30408 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
TM4SF1P30408 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC20.01■□□□□ 0.79
TM4SF1P30408 USE1-206ENST00000595101 1776 ntTSL 2 BASIC20.01■□□□□ 0.79
TM4SF1P30408 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.01■□□□□ 0.79
TM4SF1P30408 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.01■□□□□ 0.79
TM4SF1P30408 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.01■□□□□ 0.79
TM4SF1P30408 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC20.01■□□□□ 0.79
TM4SF1P30408 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.01■□□□□ 0.79
TM4SF1P30408 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC20.01■□□□□ 0.79
TM4SF1P30408 AC093433.1-201ENST00000458048 571 ntBASIC20.01■□□□□ 0.79
TM4SF1P30408 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.01■□□□□ 0.79
TM4SF1P30408 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC20.01■□□□□ 0.79
TM4SF1P30408 AC010328.2-201ENST00000597698 1111 ntBASIC20.01■□□□□ 0.79
TM4SF1P30408 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC20.01■□□□□ 0.79
TM4SF1P30408 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.01■□□□□ 0.79
TM4SF1P30408 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 LETM1P2-201ENST00000597330 2178 ntBASIC20.01■□□□□ 0.79
TM4SF1P30408 AL645608.8-201ENST00000606034 2086 ntBASIC20.01■□□□□ 0.79
TM4SF1P30408 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TM4SF1P30408 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.01■□□□□ 0.79
TM4SF1P30408 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TM4SF1P30408 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TM4SF1P30408 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms