Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 ACTG1P11-201ENST00000425411 1125 ntBASIC21■□□□□ 0.95
RXRBP28702 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC21■□□□□ 0.95
RXRBP28702 AC010234.1-201ENST00000494599 870 ntBASIC21■□□□□ 0.95
RXRBP28702 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC21■□□□□ 0.95
RXRBP28702 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 AC019193.1-201ENST00000506678 823 ntBASIC21■□□□□ 0.95
RXRBP28702 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RXRBP28702 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
RXRBP28702 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC21■□□□□ 0.95
RXRBP28702 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC21■□□□□ 0.95
RXRBP28702 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 AC025181.2-201ENST00000606994 802 ntBASIC21■□□□□ 0.95
RXRBP28702 RNF146-211ENST00000609447 607 ntTSL 4 BASIC21■□□□□ 0.95
RXRBP28702 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC21■□□□□ 0.95
RXRBP28702 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC21■□□□□ 0.95
RXRBP28702 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC21■□□□□ 0.95
RXRBP28702 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RXRBP28702 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.99■□□□□ 0.95
RXRBP28702 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RXRBP28702 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RXRBP28702 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RXRBP28702 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC20.99■□□□□ 0.95
RXRBP28702 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RXRBP28702 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RXRBP28702 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC20.99■□□□□ 0.95
RXRBP28702 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC20.99■□□□□ 0.95
RXRBP28702 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC20.99■□□□□ 0.95
RXRBP28702 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC20.99■□□□□ 0.95
RXRBP28702 KRT18P25-201ENST00000508931 1278 ntBASIC20.99■□□□□ 0.95
RXRBP28702 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC20.99■□□□□ 0.95
RXRBP28702 AP001582.1-201ENST00000525856 295 ntBASIC20.99■□□□□ 0.95
RXRBP28702 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC20.99■□□□□ 0.95
RXRBP28702 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC20.99■□□□□ 0.95
RXRBP28702 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC20.99■□□□□ 0.95
RXRBP28702 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC20.99■□□□□ 0.95
RXRBP28702 AC103691.2-201ENST00000618824 433 ntBASIC20.99■□□□□ 0.95
RXRBP28702 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.99■□□□□ 0.95
RXRBP28702 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RXRBP28702 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC20.99■□□□□ 0.95
RXRBP28702 ZBTB45P2-201ENST00000452245 1531 ntBASIC20.99■□□□□ 0.95
RXRBP28702 AC025271.4-201ENST00000621477 1726 ntBASIC20.98■□□□□ 0.95
RXRBP28702 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
RXRBP28702 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRBP28702 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.98■□□□□ 0.95
RXRBP28702 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RXRBP28702 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRBP28702 AC079178.1-201ENST00000420915 656 ntBASIC20.98■□□□□ 0.95
RXRBP28702 IDS-203ENST00000428056 1213 ntTSL 2 BASIC20.98■□□□□ 0.95
RXRBP28702 FAU-202ENST00000434372 533 ntTSL 2 BASIC20.98■□□□□ 0.95
RXRBP28702 KRT18P64-201ENST00000434946 1219 ntBASIC20.98■□□□□ 0.95
RXRBP28702 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC20.98■□□□□ 0.95
RXRBP28702 KLK11-210ENST00000600362 759 ntTSL 3 BASIC20.98■□□□□ 0.95
RXRBP28702 AC093813.1-201ENST00000605066 256 ntBASIC20.98■□□□□ 0.95
RXRBP28702 AC087045.2-201ENST00000606279 1003 ntBASIC20.98■□□□□ 0.95
RXRBP28702 AP005019.2-201ENST00000615104 511 ntBASIC20.98■□□□□ 0.95
RXRBP28702 AC244157.2-201ENST00000616239 1006 ntBASIC20.98■□□□□ 0.95
RXRBP28702 ETV2-208ENST00000621247 941 ntTSL 5 BASIC20.98■□□□□ 0.95
RXRBP28702 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRBP28702 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.98■□□□□ 0.95
RXRBP28702 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RXRBP28702 TUBB8P12-201ENST00000308911 1335 ntBASIC20.98■□□□□ 0.95
RXRBP28702 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRBP28702 TUBB7P-202ENST00000428444 1305 ntBASIC20.98■□□□□ 0.95
RXRBP28702 TUBB8P7-204ENST00000567960 1332 ntBASIC20.98■□□□□ 0.95
RXRBP28702 WIZP1-201ENST00000531444 2299 ntBASIC20.98■□□□□ 0.95
RXRBP28702 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRBP28702 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRBP28702 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRBP28702 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RXRBP28702 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RXRBP28702 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.97■□□□□ 0.95
RXRBP28702 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
RXRBP28702 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.97■□□□□ 0.95
RXRBP28702 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 PFN2-202ENST00000423691 911 ntTSL 2 BASIC20.97■□□□□ 0.95
RXRBP28702 AC026410.3-201ENST00000514280 936 ntBASIC20.97■□□□□ 0.95
RXRBP28702 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC20.97■□□□□ 0.95
RXRBP28702 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 DGAT2L7P-201ENST00000602462 744 ntBASIC20.97■□□□□ 0.95
RXRBP28702 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.97■□□□□ 0.95
RXRBP28702 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RXRBP28702 AC138028.4-201ENST00000564984 1845 ntBASIC20.97■□□□□ 0.95
RXRBP28702 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms