Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 AC068418.2-201ENST00000577309 3703 ntBASIC14.04□□□□□ -0.16
TNFSF4P23510 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.04□□□□□ -0.16
TNFSF4P23510 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
TNFSF4P23510 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.04□□□□□ -0.16
TNFSF4P23510 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 CNN2P11-201ENST00000429351 262 ntBASIC14.04□□□□□ -0.16
TNFSF4P23510 AL592309.1-201ENST00000443127 649 ntBASIC14.04□□□□□ -0.16
TNFSF4P23510 AC079140.1-201ENST00000508039 487 ntBASIC14.04□□□□□ -0.16
TNFSF4P23510 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 PRYP6-201ENST00000514804 343 ntBASIC14.04□□□□□ -0.16
TNFSF4P23510 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.04□□□□□ -0.16
TNFSF4P23510 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.04□□□□□ -0.16
TNFSF4P23510 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 AC008267.7-201ENST00000624570 1194 ntBASIC14.04□□□□□ -0.16
TNFSF4P23510 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.04□□□□□ -0.16
TNFSF4P23510 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 AC022211.2-201ENST00000585075 2527 ntBASIC14.04□□□□□ -0.16
TNFSF4P23510 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 OS9-205ENST00000413095 1660 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.04□□□□□ -0.16
TNFSF4P23510 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TNFSF4P23510 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.04□□□□□ -0.16
TNFSF4P23510 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TNFSF4P23510 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 RNF216P1-203ENST00000404404 2427 ntBASIC14.03□□□□□ -0.16
TNFSF4P23510 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 ADH5P3-201ENST00000433842 1137 ntBASIC14.03□□□□□ -0.16
TNFSF4P23510 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFSF4P23510 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
TNFSF4P23510 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFSF4P23510 AC105233.2-201ENST00000523697 349 ntBASIC14.03□□□□□ -0.16
TNFSF4P23510 AF228730.5-201ENST00000530288 346 ntBASIC14.03□□□□□ -0.16
TNFSF4P23510 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFSF4P23510 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.03□□□□□ -0.16
TNFSF4P23510 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.03□□□□□ -0.16
TNFSF4P23510 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
TNFSF4P23510 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.03□□□□□ -0.16
TNFSF4P23510 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.03□□□□□ -0.16
TNFSF4P23510 AL596442.2-201ENST00000610240 980 ntBASIC14.03□□□□□ -0.16
TNFSF4P23510 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TNFSF4P23510 AC105339.1-204ENST00000636249 355 ntBASIC14.03□□□□□ -0.16
TNFSF4P23510 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
TNFSF4P23510 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TNFSF4P23510 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
TNFSF4P23510 UXT-AS1-201ENST00000590504 1525 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms