Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.31■□□□□ 0.04
NR4A1P22736 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.31■□□□□ 0.04
NR4A1P22736 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC15.31■□□□□ 0.04
NR4A1P22736 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.31■□□□□ 0.04
NR4A1P22736 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.31■□□□□ 0.04
NR4A1P22736 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.31■□□□□ 0.04
NR4A1P22736 RN7SL510P-201ENST00000581311 263 ntBASIC15.31■□□□□ 0.04
NR4A1P22736 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
NR4A1P22736 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.31■□□□□ 0.04
NR4A1P22736 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.31■□□□□ 0.04
NR4A1P22736 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.31■□□□□ 0.04
NR4A1P22736 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.31■□□□□ 0.04
NR4A1P22736 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 PPT1-215ENST00000641471 2368 ntBASIC15.31■□□□□ 0.04
NR4A1P22736 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NR4A1P22736 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.3■□□□□ 0.04
NR4A1P22736 AC139749.1-202ENST00000617529 3139 ntBASIC15.3■□□□□ 0.04
NR4A1P22736 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.3■□□□□ 0.04
NR4A1P22736 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A1P22736 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.3■□□□□ 0.04
NR4A1P22736 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 CTNS-203ENST00000399306 803 ntTSL 3 BASIC15.3■□□□□ 0.04
NR4A1P22736 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.3■□□□□ 0.04
NR4A1P22736 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
NR4A1P22736 LSM5-204ENST00000409909 740 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A1P22736 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
NR4A1P22736 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A1P22736 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A1P22736 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A1P22736 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC15.3■□□□□ 0.04
NR4A1P22736 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A1P22736 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A1P22736 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.3■□□□□ 0.04
NR4A1P22736 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 AC010460.3-201ENST00000511359 1579 ntBASIC15.3■□□□□ 0.04
NR4A1P22736 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.3■□□□□ 0.04
NR4A1P22736 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NR4A1P22736 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.3■□□□□ 0.04
NR4A1P22736 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC15.3■□□□□ 0.04
NR4A1P22736 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.3■□□□□ 0.04
NR4A1P22736 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.3■□□□□ 0.04
NR4A1P22736 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.3■□□□□ 0.04
NR4A1P22736 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.3■□□□□ 0.04
NR4A1P22736 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 AC138035.3-201ENST00000622706 2791 ntBASIC15.3■□□□□ 0.04
NR4A1P22736 AC022532.1-201ENST00000624563 1728 ntBASIC15.3■□□□□ 0.04
NR4A1P22736 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
NR4A1P22736 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
NR4A1P22736 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
NR4A1P22736 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.29■□□□□ 0.04
NR4A1P22736 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.29■□□□□ 0.04
NR4A1P22736 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.29■□□□□ 0.04
NR4A1P22736 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.29■□□□□ 0.04
NR4A1P22736 FRMD8P1-201ENST00000440433 1524 ntBASIC15.29■□□□□ 0.04
NR4A1P22736 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
NR4A1P22736 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
NR4A1P22736 AC004870.1-201ENST00000315132 882 ntBASIC15.29■□□□□ 0.04
NR4A1P22736 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 COX5BP2-201ENST00000392354 334 ntBASIC15.29■□□□□ 0.04
NR4A1P22736 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.29■□□□□ 0.04
NR4A1P22736 FAAHP1-202ENST00000446499 1238 ntBASIC15.29■□□□□ 0.04
NR4A1P22736 AC122714.2-201ENST00000502787 707 ntBASIC15.29■□□□□ 0.04
NR4A1P22736 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
NR4A1P22736 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms