Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.6■□□□□ 0.73
NCLP19338 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
NCLP19338 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
NCLP19338 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
NCLP19338 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NCLP19338 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 INTS4P1-201ENST00000438455 1935 ntBASIC19.59■□□□□ 0.73
NCLP19338 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 PMPCAP1-201ENST00000508114 1576 ntBASIC19.59■□□□□ 0.73
NCLP19338 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 RCN1P2-201ENST00000398357 915 ntBASIC19.59■□□□□ 0.73
NCLP19338 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NCLP19338 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
NCLP19338 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.59■□□□□ 0.73
NCLP19338 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
NCLP19338 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.59■□□□□ 0.73
NCLP19338 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NCLP19338 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.59■□□□□ 0.73
NCLP19338 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NCLP19338 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NCLP19338 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
NCLP19338 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NCLP19338 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NCLP19338 AL021920.2-201ENST00000624828 1351 ntBASIC19.58■□□□□ 0.73
NCLP19338 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NCLP19338 AC010491.1-201ENST00000563101 2797 ntBASIC19.58■□□□□ 0.73
NCLP19338 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NCLP19338 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
NCLP19338 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.58■□□□□ 0.72
NCLP19338 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
NCLP19338 HLA-J-202ENST00000469281 1241 ntBASIC19.58■□□□□ 0.72
NCLP19338 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.58■□□□□ 0.72
NCLP19338 AF238378.1-201ENST00000526806 358 ntBASIC19.58■□□□□ 0.72
NCLP19338 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NCLP19338 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
NCLP19338 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.58■□□□□ 0.72
NCLP19338 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.58■□□□□ 0.72
NCLP19338 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.58■□□□□ 0.72
NCLP19338 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.58■□□□□ 0.72
NCLP19338 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.58■□□□□ 0.72
NCLP19338 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.58■□□□□ 0.72
NCLP19338 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NCLP19338 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.58■□□□□ 0.72
NCLP19338 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC19.58■□□□□ 0.72
NCLP19338 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NCLP19338 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.58■□□□□ 0.72
NCLP19338 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NCLP19338 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
NCLP19338 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.58■□□□□ 0.72
NCLP19338 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NCLP19338 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NCLP19338 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NCLP19338 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.57■□□□□ 0.72
NCLP19338 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
NCLP19338 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NCLP19338 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.57■□□□□ 0.72
NCLP19338 ACTG1P4-201ENST00000425123 1122 ntBASIC19.57■□□□□ 0.72
NCLP19338 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
NCLP19338 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 AC106795.1-205ENST00000512851 1056 ntBASIC19.57■□□□□ 0.72
NCLP19338 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.57■□□□□ 0.72
NCLP19338 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.57■□□□□ 0.72
NCLP19338 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NCLP19338 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC19.57■□□□□ 0.72
NCLP19338 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
NCLP19338 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NCLP19338 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.56■□□□□ 0.72
NCLP19338 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NCLP19338 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NCLP19338 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms