Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC15.53■□□□□ 0.08
NCK1P16333 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NCK1P16333 AC091167.2-201ENST00000579581 588 ntBASIC15.53■□□□□ 0.08
NCK1P16333 AC092329.2-201ENST00000598402 547 ntBASIC15.53■□□□□ 0.08
NCK1P16333 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.53■□□□□ 0.08
NCK1P16333 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.53■□□□□ 0.08
NCK1P16333 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NCK1P16333 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.53■□□□□ 0.08
NCK1P16333 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.53■□□□□ 0.08
NCK1P16333 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.53■□□□□ 0.08
NCK1P16333 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NCK1P16333 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NCK1P16333 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 SSR4P1-203ENST00000599569 2260 ntBASIC15.52■□□□□ 0.08
NCK1P16333 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
NCK1P16333 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.52■□□□□ 0.08
NCK1P16333 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
NCK1P16333 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.52■□□□□ 0.08
NCK1P16333 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.52■□□□□ 0.08
NCK1P16333 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.52■□□□□ 0.08
NCK1P16333 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.52■□□□□ 0.08
NCK1P16333 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.52■□□□□ 0.08
NCK1P16333 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.52■□□□□ 0.08
NCK1P16333 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC15.52■□□□□ 0.08
NCK1P16333 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
NCK1P16333 AC116407.4-201ENST00000623319 1061 ntBASIC15.52■□□□□ 0.08
NCK1P16333 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.52■□□□□ 0.08
NCK1P16333 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.52■□□□□ 0.08
NCK1P16333 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
NCK1P16333 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
NCK1P16333 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCK1P16333 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCK1P16333 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NCK1P16333 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
NCK1P16333 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCK1P16333 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCK1P16333 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NCK1P16333 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCK1P16333 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
NCK1P16333 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCK1P16333 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.52■□□□□ 0.07
NCK1P16333 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
NCK1P16333 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
NCK1P16333 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC15.51■□□□□ 0.07
NCK1P16333 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.51■□□□□ 0.07
NCK1P16333 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.51■□□□□ 0.07
NCK1P16333 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.51■□□□□ 0.07
NCK1P16333 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.51■□□□□ 0.07
NCK1P16333 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
NCK1P16333 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NCK1P16333 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
NCK1P16333 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.51■□□□□ 0.07
NCK1P16333 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 MIR648-201ENST00000385046 94 ntBASIC15.51■□□□□ 0.07
NCK1P16333 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.51■□□□□ 0.07
NCK1P16333 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.51■□□□□ 0.07
NCK1P16333 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.51■□□□□ 0.07
NCK1P16333 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.51■□□□□ 0.07
NCK1P16333 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 NKAPP1-205ENST00000585790 367 ntBASIC15.51■□□□□ 0.07
NCK1P16333 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC15.51■□□□□ 0.07
NCK1P16333 AL591684.3-201ENST00000605187 298 ntBASIC15.51■□□□□ 0.07
NCK1P16333 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 AL022326.1-202ENST00000641533 845 ntBASIC15.51■□□□□ 0.07
NCK1P16333 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.51■□□□□ 0.07
NCK1P16333 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.51■□□□□ 0.07
NCK1P16333 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
NCK1P16333 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.51■□□□□ 0.07
NCK1P16333 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.51■□□□□ 0.07
NCK1P16333 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
NCK1P16333 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms