Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 PGAM5P1-201ENST00000518923 814 ntBASIC14.7□□□□□ -0.06
HLA-DOBP13765 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 AC099522.2-201ENST00000607001 744 ntBASIC14.7□□□□□ -0.06
HLA-DOBP13765 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DOBP13765 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DOBP13765 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DOBP13765 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DOBP13765 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DOBP13765 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DOBP13765 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DOBP13765 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DOBP13765 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 KRT18P34-201ENST00000488218 1270 ntBASIC14.69□□□□□ -0.06
HLA-DOBP13765 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DOBP13765 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 AC008894.3-201ENST00000624324 3103 ntBASIC14.69□□□□□ -0.06
HLA-DOBP13765 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DOBP13765 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DOBP13765 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HLA-DOBP13765 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.69□□□□□ -0.06
HLA-DOBP13765 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 AC002056.1-201ENST00000395613 760 ntBASIC14.68□□□□□ -0.06
HLA-DOBP13765 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 AC040169.1-201ENST00000565382 521 ntBASIC14.68□□□□□ -0.06
HLA-DOBP13765 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 AC091812.2-201ENST00000619081 385 ntBASIC14.68□□□□□ -0.06
HLA-DOBP13765 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HLA-DOBP13765 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HLA-DOBP13765 WASH6P-202ENST00000359512 1437 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms