Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT3P12035 AL592424.1-201ENST00000563624 1536 ntBASIC17.27■□□□□ 0.36
KRT3P12035 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
KRT3P12035 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
KRT3P12035 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT3P12035 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT3P12035 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT3P12035 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
KRT3P12035 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT3P12035 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT3P12035 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT3P12035 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT3P12035 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT3P12035 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT3P12035 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KRT3P12035 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KRT3P12035 POLD2P1-201ENST00000511220 997 ntBASIC17.27■□□□□ 0.36
KRT3P12035 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT3P12035 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
KRT3P12035 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
KRT3P12035 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT3P12035 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT3P12035 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT3P12035 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
KRT3P12035 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
KRT3P12035 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT3P12035 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
KRT3P12035 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
KRT3P12035 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.27■□□□□ 0.35
KRT3P12035 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT3P12035 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
KRT3P12035 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
KRT3P12035 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
KRT3P12035 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT3P12035 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT3P12035 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
KRT3P12035 LINC02199-201ENST00000506655 2702 ntBASIC17.26■□□□□ 0.35
KRT3P12035 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT3P12035 AC093724.1-201ENST00000448659 1027 ntBASIC17.26■□□□□ 0.35
KRT3P12035 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT3P12035 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.26■□□□□ 0.35
KRT3P12035 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
KRT3P12035 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
KRT3P12035 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.26■□□□□ 0.35
KRT3P12035 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT3P12035 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
KRT3P12035 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT3P12035 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT3P12035 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.26■□□□□ 0.35
KRT3P12035 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT3P12035 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
KRT3P12035 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT3P12035 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT3P12035 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KRT3P12035 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KRT3P12035 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT3P12035 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
KRT3P12035 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KRT3P12035 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
KRT3P12035 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.25■□□□□ 0.35
KRT3P12035 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
KRT3P12035 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT3P12035 PGAM5P1-201ENST00000518923 814 ntBASIC17.25■□□□□ 0.35
KRT3P12035 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.25■□□□□ 0.35
KRT3P12035 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT3P12035 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.25■□□□□ 0.35
KRT3P12035 AC002347.1-201ENST00000569543 541 ntBASIC17.25■□□□□ 0.35
KRT3P12035 AC099522.2-201ENST00000607001 744 ntBASIC17.25■□□□□ 0.35
KRT3P12035 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.25■□□□□ 0.35
KRT3P12035 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
KRT3P12035 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT3P12035 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT3P12035 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.25■□□□□ 0.35
KRT3P12035 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
KRT3P12035 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
KRT3P12035 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
KRT3P12035 AC073439.1-201ENST00000624121 1774 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms