Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.21■□□□□ 0.35
RARAP10276 BX640515.1-201ENST00000617215 977 ntBASIC17.21■□□□□ 0.35
RARAP10276 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.21■□□□□ 0.35
RARAP10276 AC112504.1-201ENST00000623415 1841 ntBASIC17.21■□□□□ 0.35
RARAP10276 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.21■□□□□ 0.35
RARAP10276 CDC14C-201ENST00000428251 1719 ntBASIC17.21■□□□□ 0.35
RARAP10276 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.21■□□□□ 0.35
RARAP10276 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
RARAP10276 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.34
RARAP10276 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
RARAP10276 BCAR1-209ENST00000546196 1340 ntBASIC17.21■□□□□ 0.34
RARAP10276 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.2■□□□□ 0.34
RARAP10276 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.2■□□□□ 0.34
RARAP10276 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
RARAP10276 AC026396.1-201ENST00000419388 421 ntBASIC17.2■□□□□ 0.34
RARAP10276 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.2■□□□□ 0.34
RARAP10276 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.2■□□□□ 0.34
RARAP10276 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.2■□□□□ 0.34
RARAP10276 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
RARAP10276 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.2■□□□□ 0.34
RARAP10276 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.2■□□□□ 0.34
RARAP10276 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.2■□□□□ 0.34
RARAP10276 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.2■□□□□ 0.34
RARAP10276 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.2■□□□□ 0.34
RARAP10276 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.2■□□□□ 0.34
RARAP10276 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.2■□□□□ 0.34
RARAP10276 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RARAP10276 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
RARAP10276 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
RARAP10276 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RARAP10276 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RARAP10276 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RARAP10276 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RARAP10276 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RARAP10276 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
RARAP10276 AC092384.3-202ENST00000564646 2873 ntBASIC17.19■□□□□ 0.34
RARAP10276 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.19■□□□□ 0.34
RARAP10276 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.19■□□□□ 0.34
RARAP10276 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RARAP10276 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.19■□□□□ 0.34
RARAP10276 AL009183.1-201ENST00000603760 355 ntBASIC17.19■□□□□ 0.34
RARAP10276 AC120114.3-201ENST00000611923 658 ntBASIC17.19■□□□□ 0.34
RARAP10276 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
RARAP10276 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.19■□□□□ 0.34
RARAP10276 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.19■□□□□ 0.34
RARAP10276 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.19■□□□□ 0.34
RARAP10276 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17.19■□□□□ 0.34
RARAP10276 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RARAP10276 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC17.19■□□□□ 0.34
RARAP10276 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RARAP10276 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.19■□□□□ 0.34
RARAP10276 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 AP005117.1-202ENST00000581724 1908 ntBASIC17.19■□□□□ 0.34
RARAP10276 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.19■□□□□ 0.34
RARAP10276 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RARAP10276 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RARAP10276 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.18■□□□□ 0.34
RARAP10276 LINC02447-202ENST00000501888 2146 ntBASIC17.18■□□□□ 0.34
RARAP10276 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms