Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.43□□□□□ -0.1
UBCP0CG48 AC021087.4-201ENST00000563761 564 ntBASIC14.43□□□□□ -0.1
UBCP0CG48 PRELID1P1-202ENST00000567272 903 ntBASIC14.43□□□□□ -0.1
UBCP0CG48 PNMT-203ENST00000581428 677 ntTSL 2 BASIC14.43□□□□□ -0.1
UBCP0CG48 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC14.43□□□□□ -0.1
UBCP0CG48 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.43□□□□□ -0.1
UBCP0CG48 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
UBCP0CG48 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
UBCP0CG48 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UBCP0CG48 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
UBCP0CG48 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC14.43□□□□□ -0.1
UBCP0CG48 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
UBCP0CG48 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
UBCP0CG48 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.42□□□□□ -0.1
UBCP0CG48 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.42□□□□□ -0.1
UBCP0CG48 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
UBCP0CG48 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
UBCP0CG48 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
UBCP0CG48 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 MIR648-201ENST00000385046 94 ntBASIC14.42□□□□□ -0.1
UBCP0CG48 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.42□□□□□ -0.1
UBCP0CG48 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.42□□□□□ -0.1
UBCP0CG48 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.42□□□□□ -0.1
UBCP0CG48 AC136632.2-201ENST00000512891 861 ntBASIC14.42□□□□□ -0.1
UBCP0CG48 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.42□□□□□ -0.1
UBCP0CG48 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.42□□□□□ -0.1
UBCP0CG48 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UBCP0CG48 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
UBCP0CG48 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
UBCP0CG48 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.42□□□□□ -0.1
UBCP0CG48 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
UBCP0CG48 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBCP0CG48 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UBCP0CG48 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UBCP0CG48 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC14.41□□□□□ -0.1
UBCP0CG48 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.41□□□□□ -0.1
UBCP0CG48 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.41□□□□□ -0.1
UBCP0CG48 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UBCP0CG48 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
UBCP0CG48 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.41□□□□□ -0.1
UBCP0CG48 KRT18P27-201ENST00000427733 1299 ntBASIC14.41□□□□□ -0.1
UBCP0CG48 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.41□□□□□ -0.1
UBCP0CG48 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.41□□□□□ -0.1
UBCP0CG48 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.41□□□□□ -0.1
UBCP0CG48 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.41□□□□□ -0.1
UBCP0CG48 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.41□□□□□ -0.1
UBCP0CG48 MIR1199-201ENST00000621445 119 ntBASIC14.41□□□□□ -0.1
UBCP0CG48 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.41□□□□□ -0.1
UBCP0CG48 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
UBCP0CG48 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBCP0CG48 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms