Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MRPS18AP1-201ENST00000414458 589 ntBASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 AGGF1P2-201ENST00000426656 2106 ntBASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 RN7SL828P-201ENST00000607615 303 ntBASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
RAB40ALP0C0E4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 AC105021.1-202ENST00000570572 669 ntBASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 AC024267.1-201ENST00000582320 895 ntBASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 FER1L4-210ENST00000615531 5998 ntBASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 AC087499.5-201ENST00000452760 1342 ntBASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.41■□□□□ 0.06
RAB40ALP0C0E4 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 PCDHA14-201ENST00000506751 2298 ntBASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 AC093724.1-201ENST00000448659 1027 ntBASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 AL589739.1-201ENST00000607720 493 ntBASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RAB40ALP0C0E4 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms