Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.65□□□□□ -0.23
CTSDP07339 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC13.64□□□□□ -0.23
CTSDP07339 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.64□□□□□ -0.23
CTSDP07339 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC13.64□□□□□ -0.23
CTSDP07339 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CTSDP07339 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CTSDP07339 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC13.64□□□□□ -0.23
CTSDP07339 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 IGHV3-47-201ENST00000425060 335 ntBASIC13.64□□□□□ -0.23
CTSDP07339 PMS2P1-201ENST00000431037 1228 ntBASIC13.64□□□□□ -0.23
CTSDP07339 AC087163.2-201ENST00000457299 853 ntBASIC13.64□□□□□ -0.23
CTSDP07339 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC13.64□□□□□ -0.23
CTSDP07339 AL445228.2-201ENST00000605589 952 ntBASIC13.64□□□□□ -0.23
CTSDP07339 AL139424.1-201ENST00000607572 797 ntBASIC13.64□□□□□ -0.23
CTSDP07339 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CTSDP07339 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC13.64□□□□□ -0.23
CTSDP07339 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CTSDP07339 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.64□□□□□ -0.23
CTSDP07339 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.64□□□□□ -0.23
CTSDP07339 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CTSDP07339 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
CTSDP07339 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.64□□□□□ -0.23
CTSDP07339 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CTSDP07339 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
CTSDP07339 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CTSDP07339 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CTSDP07339 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC13.64□□□□□ -0.23
CTSDP07339 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
CTSDP07339 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
CTSDP07339 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CTSDP07339 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSDP07339 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 SLC22A20-204ENST00000530038 1673 ntBASIC13.63□□□□□ -0.23
CTSDP07339 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CTSDP07339 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 AL353732.1-201ENST00000569618 1459 ntBASIC13.63□□□□□ -0.23
CTSDP07339 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSDP07339 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
CTSDP07339 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CTSDP07339 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CTSDP07339 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
CTSDP07339 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC13.63□□□□□ -0.23
CTSDP07339 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSDP07339 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC13.63□□□□□ -0.23
CTSDP07339 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC13.63□□□□□ -0.23
CTSDP07339 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSDP07339 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
CTSDP07339 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.63□□□□□ -0.23
CTSDP07339 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
CTSDP07339 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CTSDP07339 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.63□□□□□ -0.23
CTSDP07339 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.63□□□□□ -0.23
CTSDP07339 AC064862.7-201ENST00000604520 867 ntBASIC13.63□□□□□ -0.23
CTSDP07339 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.63□□□□□ -0.23
CTSDP07339 AF228730.7-201ENST00000641842 219 ntBASIC13.63□□□□□ -0.23
CTSDP07339 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms