Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 RARRES2P9-201ENST00000565168 469 ntBASIC16.38■□□□□ 0.21
TRBC1P01850 AP001059.3-201ENST00000619053 235 ntBASIC16.38■□□□□ 0.21
TRBC1P01850 LINC00628-201ENST00000628516 1289 ntBASIC16.38■□□□□ 0.21
TRBC1P01850 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.38■□□□□ 0.21
TRBC1P01850 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBC1P01850 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
TRBC1P01850 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBC1P01850 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TRBC1P01850 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRBC1P01850 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
TRBC1P01850 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBC1P01850 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRBC1P01850 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
TRBC1P01850 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRBC1P01850 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRBC1P01850 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBC1P01850 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBC1P01850 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBC1P01850 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.37■□□□□ 0.21
TRBC1P01850 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 AC109322.1-201ENST00000524499 1264 ntBASIC16.37■□□□□ 0.21
TRBC1P01850 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBC1P01850 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 AC026150.2-201ENST00000564693 1156 ntBASIC16.37■□□□□ 0.21
TRBC1P01850 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 AL365330.1-201ENST00000607459 531 ntBASIC16.37■□□□□ 0.21
TRBC1P01850 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.37■□□□□ 0.21
TRBC1P01850 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 AC006449.5-201ENST00000610658 2098 ntBASIC16.37■□□□□ 0.21
TRBC1P01850 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
TRBC1P01850 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBC1P01850 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.37■□□□□ 0.21
TRBC1P01850 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRBC1P01850 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.37■□□□□ 0.21
TRBC1P01850 AC006449.6-201ENST00000612330 2296 ntBASIC16.36■□□□□ 0.21
TRBC1P01850 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBC1P01850 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBC1P01850 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
TRBC1P01850 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBC1P01850 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBC1P01850 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBC1P01850 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBC1P01850 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
TRBC1P01850 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.36■□□□□ 0.21
TRBC1P01850 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.36■□□□□ 0.21
TRBC1P01850 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRBC1P01850 RNA5SP410-201ENST00000516285 106 ntBASIC16.36■□□□□ 0.21
TRBC1P01850 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRBC1P01850 AL512356.2-201ENST00000546955 174 ntBASIC16.36■□□□□ 0.21
TRBC1P01850 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.36■□□□□ 0.21
TRBC1P01850 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 AC061975.2-201ENST00000581722 295 ntBASIC16.36■□□□□ 0.21
TRBC1P01850 AC024267.1-201ENST00000582320 895 ntBASIC16.36■□□□□ 0.21
TRBC1P01850 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.36■□□□□ 0.21
TRBC1P01850 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRBC1P01850 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.36■□□□□ 0.21
TRBC1P01850 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRBC1P01850 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
TRBC1P01850 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRBC1P01850 KRT18P28-201ENST00000453838 1332 ntBASIC16.36■□□□□ 0.21
TRBC1P01850 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
TRBC1P01850 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms