Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LGI1O95970 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LGI1O95970 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LGI1O95970 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LGI1O95970 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.17■□□□□ 0.02
LGI1O95970 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
LGI1O95970 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
LGI1O95970 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
LGI1O95970 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
LGI1O95970 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.17■□□□□ 0.02
LGI1O95970 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.17■□□□□ 0.02
LGI1O95970 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
LGI1O95970 U82695.1-201ENST00000635752 1889 ntBASIC15.16■□□□□ 0.02
LGI1O95970 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.16■□□□□ 0.02
LGI1O95970 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.16■□□□□ 0.02
LGI1O95970 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.16■□□□□ 0.02
LGI1O95970 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.16■□□□□ 0.02
LGI1O95970 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.16■□□□□ 0.02
LGI1O95970 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.16■□□□□ 0.02
LGI1O95970 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.16■□□□□ 0.02
LGI1O95970 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
LGI1O95970 PMS2P4-201ENST00000412466 1052 ntBASIC15.16■□□□□ 0.02
LGI1O95970 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.16■□□□□ 0.02
LGI1O95970 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.16■□□□□ 0.02
LGI1O95970 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.16■□□□□ 0.02
LGI1O95970 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 AC092910.1-201ENST00000482027 1129 ntBASIC15.16■□□□□ 0.02
LGI1O95970 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.16■□□□□ 0.02
LGI1O95970 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LGI1O95970 AL031432.2-201ENST00000566714 459 ntBASIC15.16■□□□□ 0.02
LGI1O95970 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.16■□□□□ 0.02
LGI1O95970 AL928711.1-201ENST00000570165 459 ntBASIC15.16■□□□□ 0.02
LGI1O95970 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.16■□□□□ 0.02
LGI1O95970 AL645728.2-201ENST00000641974 660 ntBASIC15.16■□□□□ 0.02
LGI1O95970 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.16■□□□□ 0.02
LGI1O95970 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
LGI1O95970 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
LGI1O95970 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LGI1O95970 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
LGI1O95970 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 AC068418.2-201ENST00000577309 3703 ntBASIC15.15■□□□□ 0.02
LGI1O95970 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.15■□□□□ 0.02
LGI1O95970 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.15■□□□□ 0.02
LGI1O95970 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
LGI1O95970 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.15■□□□□ 0.02
LGI1O95970 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.15■□□□□ 0.02
LGI1O95970 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.15■□□□□ 0.02
LGI1O95970 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC15.15■□□□□ 0.02
LGI1O95970 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.15■□□□□ 0.02
LGI1O95970 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.15■□□□□ 0.02
LGI1O95970 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
LGI1O95970 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.15■□□□□ 0.02
LGI1O95970 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.15■□□□□ 0.02
LGI1O95970 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.15■□□□□ 0.02
LGI1O95970 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.15■□□□□ 0.02
LGI1O95970 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.15■□□□□ 0.02
LGI1O95970 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LGI1O95970 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LGI1O95970 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LGI1O95970 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LGI1O95970 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.14■□□□□ 0.01
LGI1O95970 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LGI1O95970 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms