Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.76□□□□□ -0.21
SIX6O95475 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.76□□□□□ -0.21
SIX6O95475 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
SIX6O95475 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC13.76□□□□□ -0.21
SIX6O95475 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC13.76□□□□□ -0.21
SIX6O95475 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 MMD2-204ENST00000612910 778 ntTSL 5 BASIC13.76□□□□□ -0.21
SIX6O95475 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SIX6O95475 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SIX6O95475 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SIX6O95475 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.76□□□□□ -0.21
SIX6O95475 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
SIX6O95475 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SIX6O95475 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SIX6O95475 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
SIX6O95475 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SIX6O95475 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
SIX6O95475 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC13.75□□□□□ -0.21
SIX6O95475 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SIX6O95475 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
SIX6O95475 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC13.75□□□□□ -0.21
SIX6O95475 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 AC034232.1-201ENST00000506026 1064 ntBASIC13.75□□□□□ -0.21
SIX6O95475 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.75□□□□□ -0.21
SIX6O95475 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC13.75□□□□□ -0.21
SIX6O95475 FITM1-202ENST00000559294 800 ntBASIC13.75□□□□□ -0.21
SIX6O95475 GCSHP2-201ENST00000560971 527 ntBASIC13.75□□□□□ -0.21
SIX6O95475 AP003071.4-201ENST00000562276 1284 ntBASIC13.75□□□□□ -0.21
SIX6O95475 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.75□□□□□ -0.21
SIX6O95475 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.75□□□□□ -0.21
SIX6O95475 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.75□□□□□ -0.21
SIX6O95475 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SIX6O95475 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.75□□□□□ -0.21
SIX6O95475 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
SIX6O95475 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC13.75□□□□□ -0.21
SIX6O95475 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.75□□□□□ -0.21
SIX6O95475 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms