Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.29■■□□□ 1
LTN1O94822 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC21.29■■□□□ 1
LTN1O94822 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC21.29■■□□□ 1
LTN1O94822 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LTN1O94822 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC21.29■■□□□ 1
LTN1O94822 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.29■■□□□ 1
LTN1O94822 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC21.29■■□□□ 1
LTN1O94822 PTP4A1P2-201ENST00000546033 454 ntBASIC21.29■■□□□ 1
LTN1O94822 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.29■■□□□ 1
LTN1O94822 AL022328.1-201ENST00000610050 478 ntBASIC21.29■■□□□ 1
LTN1O94822 AC005252.2-201ENST00000624630 1141 ntBASIC21.29■■□□□ 1
LTN1O94822 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LTN1O94822 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LTN1O94822 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.29■■□□□ 1
LTN1O94822 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC21.29■■□□□ 1
LTN1O94822 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC21.29■■□□□ 1
LTN1O94822 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC21.29■■□□□ 1
LTN1O94822 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.29■■□□□ 1
LTN1O94822 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC21.28■■□□□ 1
LTN1O94822 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.28■■□□□ 1
LTN1O94822 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LTN1O94822 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC21.28■■□□□ 1
LTN1O94822 AC012441.1-201ENST00000446669 685 ntBASIC21.28■■□□□ 1
LTN1O94822 AL355864.2-201ENST00000447420 863 ntBASIC21.28■■□□□ 1
LTN1O94822 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC21.28■■□□□ 1
LTN1O94822 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC21.28■■□□□ 1
LTN1O94822 KRT90P-201ENST00000549264 1064 ntBASIC21.28■■□□□ 1
LTN1O94822 MIR6799-201ENST00000620297 69 ntBASIC21.28■■□□□ 1
LTN1O94822 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC21.28■■□□□ 1
LTN1O94822 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LTN1O94822 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.28■■□□□ 1
LTN1O94822 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LTN1O94822 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC21.28■■□□□ 1
LTN1O94822 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.28■■□□□ 1
LTN1O94822 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LTN1O94822 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
LTN1O94822 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LTN1O94822 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
LTN1O94822 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
LTN1O94822 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC21.28■■□□□ 1
LTN1O94822 KRT18P43-201ENST00000469825 1281 ntBASIC21.28■■□□□ 1
LTN1O94822 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC21.28■■□□□ 1
LTN1O94822 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC21.28■■□□□ 1
LTN1O94822 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC21.28■■□□□ 1
LTN1O94822 MIR4538-201ENST00000581377 78 ntBASIC21.28■■□□□ 1
LTN1O94822 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC21.28■■□□□ 1
LTN1O94822 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LTN1O94822 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC21.28■■□□□ 1
LTN1O94822 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC21.28■■□□□ 1
LTN1O94822 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LTN1O94822 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC21.27■■□□□ 1
LTN1O94822 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LTN1O94822 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LTN1O94822 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LTN1O94822 AL121723.1-201ENST00000445194 1519 ntBASIC21.27■■□□□ 1
LTN1O94822 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.27■■□□□ 1
LTN1O94822 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LTN1O94822 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC21.27■■□□□ 1
LTN1O94822 VDAC1P7-201ENST00000462417 847 ntBASIC21.27■■□□□ 1
LTN1O94822 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
LTN1O94822 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC21.27■■□□□ 1
LTN1O94822 RIT1-205ENST00000539040 919 ntTSL 2 BASIC21.27■■□□□ 1
LTN1O94822 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC21.27■■□□□ 1
LTN1O94822 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC21.27■■□□□ 1
LTN1O94822 AC000095.1-201ENST00000603208 874 ntBASIC21.27■■□□□ 1
LTN1O94822 AC009542.2-202ENST00000619004 1067 ntBASIC21.27■■□□□ 1
LTN1O94822 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LTN1O94822 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC21.27■■□□□ 1
LTN1O94822 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
LTN1O94822 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.27■■□□□ 1
LTN1O94822 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
LTN1O94822 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LTN1O94822 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LTN1O94822 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LTN1O94822 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
LTN1O94822 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC21.26■□□□□ 0.99
LTN1O94822 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LTN1O94822 AC134915.1-201ENST00000426461 574 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms