Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.69□□□□□ -0.06
ZIC3O60481 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
ZIC3O60481 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ZIC3O60481 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.69□□□□□ -0.06
ZIC3O60481 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.68□□□□□ -0.06
ZIC3O60481 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.68□□□□□ -0.06
ZIC3O60481 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 MIR943-201ENST00000401286 94 ntBASIC14.68□□□□□ -0.06
ZIC3O60481 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.68□□□□□ -0.06
ZIC3O60481 AC055876.3-201ENST00000431496 288 ntBASIC14.68□□□□□ -0.06
ZIC3O60481 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.68□□□□□ -0.06
ZIC3O60481 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.68□□□□□ -0.06
ZIC3O60481 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.68□□□□□ -0.06
ZIC3O60481 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.68□□□□□ -0.06
ZIC3O60481 AL390955.2-201ENST00000603032 514 ntBASIC14.68□□□□□ -0.06
ZIC3O60481 AL133215.2-201ENST00000609242 977 ntBASIC14.68□□□□□ -0.06
ZIC3O60481 AC138649.4-201ENST00000612222 287 ntBASIC14.68□□□□□ -0.06
ZIC3O60481 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ZIC3O60481 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ZIC3O60481 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
ZIC3O60481 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
ZIC3O60481 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.68□□□□□ -0.06
ZIC3O60481 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.68□□□□□ -0.06
ZIC3O60481 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.68□□□□□ -0.06
ZIC3O60481 OR6D1P-203ENST00000641209 4860 ntBASIC14.67□□□□□ -0.06
ZIC3O60481 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ZIC3O60481 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.67□□□□□ -0.06
ZIC3O60481 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.67□□□□□ -0.06
ZIC3O60481 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ZIC3O60481 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.67□□□□□ -0.06
ZIC3O60481 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.67□□□□□ -0.06
ZIC3O60481 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
ZIC3O60481 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.67□□□□□ -0.06
ZIC3O60481 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
ZIC3O60481 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
ZIC3O60481 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 AC097493.3-201ENST00000509725 367 ntBASIC14.67□□□□□ -0.06
ZIC3O60481 AC069120.2-201ENST00000524091 540 ntBASIC14.67□□□□□ -0.06
ZIC3O60481 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.67□□□□□ -0.06
ZIC3O60481 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.67□□□□□ -0.06
ZIC3O60481 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.67□□□□□ -0.06
ZIC3O60481 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.67□□□□□ -0.06
ZIC3O60481 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.67□□□□□ -0.06
ZIC3O60481 FO538757.1-201ENST00000623083 1397 ntBASIC14.67□□□□□ -0.06
ZIC3O60481 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ZIC3O60481 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
ZIC3O60481 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZIC3O60481 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC3O60481 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ZIC3O60481 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.66□□□□□ -0.06
ZIC3O60481 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms