Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.67■□□□□ 0.1
LCMT2O60294 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.67■□□□□ 0.1
LCMT2O60294 AC084121.4-201ENST00000641598 221 ntBASIC15.67■□□□□ 0.1
LCMT2O60294 AF228730.8-201ENST00000642140 221 ntBASIC15.67■□□□□ 0.1
LCMT2O60294 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
LCMT2O60294 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.67■□□□□ 0.1
LCMT2O60294 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
LCMT2O60294 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.67■□□□□ 0.1
LCMT2O60294 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
LCMT2O60294 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.67■□□□□ 0.1
LCMT2O60294 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LCMT2O60294 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LCMT2O60294 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.66■□□□□ 0.1
LCMT2O60294 AC006449.6-201ENST00000612330 2296 ntBASIC15.66■□□□□ 0.1
LCMT2O60294 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.66■□□□□ 0.1
LCMT2O60294 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LCMT2O60294 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.66■□□□□ 0.1
LCMT2O60294 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LCMT2O60294 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.66■□□□□ 0.1
LCMT2O60294 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.66■□□□□ 0.1
LCMT2O60294 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.66■□□□□ 0.1
LCMT2O60294 CNN2P11-201ENST00000429351 262 ntBASIC15.66■□□□□ 0.1
LCMT2O60294 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.66■□□□□ 0.1
LCMT2O60294 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.66■□□□□ 0.1
LCMT2O60294 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.66■□□□□ 0.1
LCMT2O60294 SLC25A39P2-201ENST00000537614 270 ntBASIC15.66■□□□□ 0.1
LCMT2O60294 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.66■□□□□ 0.1
LCMT2O60294 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.66■□□□□ 0.1
LCMT2O60294 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.66■□□□□ 0.1
LCMT2O60294 AC004835.2-201ENST00000603762 682 ntBASIC15.66■□□□□ 0.1
LCMT2O60294 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.66■□□□□ 0.1
LCMT2O60294 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.66■□□□□ 0.1
LCMT2O60294 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LCMT2O60294 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.66■□□□□ 0.1
LCMT2O60294 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LCMT2O60294 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LCMT2O60294 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC15.65■□□□□ 0.1
LCMT2O60294 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 CYP2T1P-202ENST00000641596 2535 ntBASIC15.65■□□□□ 0.1
LCMT2O60294 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LCMT2O60294 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.65■□□□□ 0.1
LCMT2O60294 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LCMT2O60294 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
LCMT2O60294 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.65■□□□□ 0.1
LCMT2O60294 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.65■□□□□ 0.1
LCMT2O60294 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.65■□□□□ 0.1
LCMT2O60294 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 AL627223.1-201ENST00000416693 442 ntBASIC15.65■□□□□ 0.1
LCMT2O60294 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.65■□□□□ 0.1
LCMT2O60294 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.65■□□□□ 0.1
LCMT2O60294 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.65■□□□□ 0.1
LCMT2O60294 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LCMT2O60294 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LCMT2O60294 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.65■□□□□ 0.1
LCMT2O60294 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.65■□□□□ 0.1
LCMT2O60294 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LCMT2O60294 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.65■□□□□ 0.1
LCMT2O60294 AL596087.1-201ENST00000400979 1969 ntBASIC15.65■□□□□ 0.1
LCMT2O60294 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LCMT2O60294 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LCMT2O60294 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.65■□□□□ 0.1
LCMT2O60294 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LCMT2O60294 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LCMT2O60294 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms