Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PEX1O43933 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.05■□□□□ 0.16
PEX1O43933 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.05■□□□□ 0.16
PEX1O43933 AC068587.6-202ENST00000641839 5619 ntBASIC16.05■□□□□ 0.16
PEX1O43933 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.05■□□□□ 0.16
PEX1O43933 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PEX1O43933 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.05■□□□□ 0.16
PEX1O43933 MIR574-201ENST00000385209 96 ntBASIC16.05■□□□□ 0.16
PEX1O43933 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.05■□□□□ 0.16
PEX1O43933 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.05■□□□□ 0.16
PEX1O43933 AC092910.1-201ENST00000482027 1129 ntBASIC16.05■□□□□ 0.16
PEX1O43933 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PEX1O43933 AC012640.2-201ENST00000561606 901 ntBASIC16.05■□□□□ 0.16
PEX1O43933 AC106730.1-201ENST00000566722 1090 ntBASIC16.05■□□□□ 0.16
PEX1O43933 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.05■□□□□ 0.16
PEX1O43933 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.05■□□□□ 0.16
PEX1O43933 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.05■□□□□ 0.16
PEX1O43933 AC008735.5-201ENST00000623544 497 ntBASIC16.05■□□□□ 0.16
PEX1O43933 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PEX1O43933 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PEX1O43933 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.05■□□□□ 0.16
PEX1O43933 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PEX1O43933 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.05■□□□□ 0.16
PEX1O43933 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PEX1O43933 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 AL049757.1-201ENST00000616842 1596 ntBASIC16.04■□□□□ 0.16
PEX1O43933 AC004817.3-201ENST00000602957 2129 ntBASIC16.04■□□□□ 0.16
PEX1O43933 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.04■□□□□ 0.16
PEX1O43933 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.04■□□□□ 0.16
PEX1O43933 AL353593.2-201ENST00000602529 1483 ntBASIC16.04■□□□□ 0.16
PEX1O43933 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PEX1O43933 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.04■□□□□ 0.16
PEX1O43933 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PEX1O43933 SIGLEC16-201ENST00000599858 1437 ntBASIC16.04■□□□□ 0.16
PEX1O43933 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PEX1O43933 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.04■□□□□ 0.16
PEX1O43933 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.04■□□□□ 0.16
PEX1O43933 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.04■□□□□ 0.16
PEX1O43933 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.04■□□□□ 0.16
PEX1O43933 LAGE3P1-201ENST00000425356 484 ntBASIC16.04■□□□□ 0.16
PEX1O43933 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.04■□□□□ 0.16
PEX1O43933 PRYP5-201ENST00000451909 266 ntBASIC16.04■□□□□ 0.16
PEX1O43933 HLA-J-202ENST00000469281 1241 ntBASIC16.04■□□□□ 0.16
PEX1O43933 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.04■□□□□ 0.16
PEX1O43933 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.04■□□□□ 0.16
PEX1O43933 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.04■□□□□ 0.16
PEX1O43933 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.04■□□□□ 0.16
PEX1O43933 AC105339.3-201ENST00000560043 636 ntBASIC16.04■□□□□ 0.16
PEX1O43933 AL671883.3-201ENST00000603274 991 ntBASIC16.04■□□□□ 0.16
PEX1O43933 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.04■□□□□ 0.16
PEX1O43933 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PEX1O43933 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PEX1O43933 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PEX1O43933 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.04■□□□□ 0.16
PEX1O43933 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
PEX1O43933 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.04■□□□□ 0.16
PEX1O43933 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PEX1O43933 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.04■□□□□ 0.16
PEX1O43933 AP005117.1-202ENST00000581724 1908 ntBASIC16.04■□□□□ 0.16
PEX1O43933 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PEX1O43933 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PEX1O43933 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PEX1O43933 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.03■□□□□ 0.16
PEX1O43933 ZNF259P1-201ENST00000407656 1365 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms