Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.13■□□□□ 0.01
IDH3BO43837 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
IDH3BO43837 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.13■□□□□ 0.01
IDH3BO43837 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.13■□□□□ 0.01
IDH3BO43837 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
IDH3BO43837 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.13■□□□□ 0.01
IDH3BO43837 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.13■□□□□ 0.01
IDH3BO43837 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.13■□□□□ 0.01
IDH3BO43837 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.13■□□□□ 0.01
IDH3BO43837 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
IDH3BO43837 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 BX005266.1-201ENST00000473402 457 ntBASIC15.13■□□□□ 0.01
IDH3BO43837 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.13■□□□□ 0.01
IDH3BO43837 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC15.13■□□□□ 0.01
IDH3BO43837 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.13■□□□□ 0.01
IDH3BO43837 NKAPP1-205ENST00000585790 367 ntBASIC15.13■□□□□ 0.01
IDH3BO43837 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 AC064862.7-201ENST00000604520 867 ntBASIC15.13■□□□□ 0.01
IDH3BO43837 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC15.13■□□□□ 0.01
IDH3BO43837 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 AF228730.7-201ENST00000641842 219 ntBASIC15.13■□□□□ 0.01
IDH3BO43837 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
IDH3BO43837 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.13■□□□□ 0.01
IDH3BO43837 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 TNRC18P2-201ENST00000417666 2714 ntBASIC15.13■□□□□ 0.01
IDH3BO43837 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
IDH3BO43837 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.13■□□□□ 0.01
IDH3BO43837 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
IDH3BO43837 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.12■□□□□ 0.01
IDH3BO43837 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
IDH3BO43837 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.12■□□□□ 0.01
IDH3BO43837 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.12■□□□□ 0.01
IDH3BO43837 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.12■□□□□ 0.01
IDH3BO43837 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.12■□□□□ 0.01
IDH3BO43837 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC15.12■□□□□ 0.01
IDH3BO43837 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
IDH3BO43837 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.12■□□□□ 0.01
IDH3BO43837 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
IDH3BO43837 PAWRP1-201ENST00000451083 565 ntBASIC15.12■□□□□ 0.01
IDH3BO43837 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.12■□□□□ 0.01
IDH3BO43837 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC15.12■□□□□ 0.01
IDH3BO43837 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC15.12■□□□□ 0.01
IDH3BO43837 AC138894.3-201ENST00000603787 634 ntBASIC15.12■□□□□ 0.01
IDH3BO43837 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
IDH3BO43837 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
IDH3BO43837 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.12■□□□□ 0.01
IDH3BO43837 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
IDH3BO43837 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
IDH3BO43837 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
IDH3BO43837 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.12■□□□□ 0.01
IDH3BO43837 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.12■□□□□ 0.01
IDH3BO43837 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.12■□□□□ 0.01
IDH3BO43837 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.11■□□□□ 0.01
IDH3BO43837 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.11■□□□□ 0.01
IDH3BO43837 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
IDH3BO43837 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms