Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 ACTG1P14-201ENST00000446382 1122 ntBASIC14.59□□□□□ -0.07
TRAF3IP2O43734 RN7SL589P-201ENST00000481268 310 ntBASIC14.59□□□□□ -0.07
TRAF3IP2O43734 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 FAM86C2P-203ENST00000528684 1004 ntBASIC14.59□□□□□ -0.07
TRAF3IP2O43734 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 AL138918.1-201ENST00000568306 659 ntBASIC14.59□□□□□ -0.07
TRAF3IP2O43734 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 AC018695.7-201ENST00000624587 2492 ntBASIC14.59□□□□□ -0.07
TRAF3IP2O43734 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.59□□□□□ -0.07
TRAF3IP2O43734 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAF3IP2O43734 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAF3IP2O43734 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAF3IP2O43734 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
TRAF3IP2O43734 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TRAF3IP2O43734 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC14.58□□□□□ -0.07
TRAF3IP2O43734 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.58□□□□□ -0.07
TRAF3IP2O43734 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TRAF3IP2O43734 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 DNAJB3-201ENST00000446806 729 ntBASIC14.58□□□□□ -0.08
TRAF3IP2O43734 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.58□□□□□ -0.08
TRAF3IP2O43734 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.58□□□□□ -0.08
TRAF3IP2O43734 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TRAF3IP2O43734 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms