Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHMP2AO43633 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP2AO43633 AC084018.2-201ENST00000613093 2607 ntBASIC18.4■□□□□ 0.54
CHMP2AO43633 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP2AO43633 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP2AO43633 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP2AO43633 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP2AO43633 AL589702.1-201ENST00000641229 1509 ntBASIC18.4■□□□□ 0.54
CHMP2AO43633 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CHMP2AO43633 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP2AO43633 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CHMP2AO43633 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 AL512356.2-201ENST00000546955 174 ntBASIC18.4■□□□□ 0.54
CHMP2AO43633 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP2AO43633 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP2AO43633 MIR4453-201ENST00000584019 89 ntBASIC18.4■□□□□ 0.54
CHMP2AO43633 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.4■□□□□ 0.54
CHMP2AO43633 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP2AO43633 AC003101.2-201ENST00000612557 442 ntBASIC18.4■□□□□ 0.54
CHMP2AO43633 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.4■□□□□ 0.54
CHMP2AO43633 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.4■□□□□ 0.54
CHMP2AO43633 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 TUBB3P1-201ENST00000405796 1332 ntBASIC18.4■□□□□ 0.54
CHMP2AO43633 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHMP2AO43633 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP2AO43633 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHMP2AO43633 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CHMP2AO43633 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP2AO43633 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP2AO43633 SPDYE7P-202ENST00000420373 878 ntBASIC18.39■□□□□ 0.53
CHMP2AO43633 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP2AO43633 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.39■□□□□ 0.53
CHMP2AO43633 AC125807.1-201ENST00000483097 614 ntBASIC18.39■□□□□ 0.53
CHMP2AO43633 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.39■□□□□ 0.53
CHMP2AO43633 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.39■□□□□ 0.53
CHMP2AO43633 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CHMP2AO43633 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
CHMP2AO43633 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP2AO43633 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP2AO43633 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CHMP2AO43633 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP2AO43633 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP2AO43633 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.39■□□□□ 0.53
CHMP2AO43633 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHMP2AO43633 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.39■□□□□ 0.53
CHMP2AO43633 ME2P1-201ENST00000426028 1970 ntBASIC18.39■□□□□ 0.53
CHMP2AO43633 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 AC099398.1-201ENST00000567919 2776 ntBASIC18.38■□□□□ 0.53
CHMP2AO43633 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP2AO43633 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP2AO43633 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP2AO43633 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.38■□□□□ 0.53
CHMP2AO43633 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.38■□□□□ 0.53
CHMP2AO43633 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHMP2AO43633 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP2AO43633 AL355385.1-201ENST00000606123 409 ntBASIC18.38■□□□□ 0.53
CHMP2AO43633 AC018529.1-201ENST00000613063 361 ntBASIC18.38■□□□□ 0.53
CHMP2AO43633 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.38■□□□□ 0.53
CHMP2AO43633 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CHMP2AO43633 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHMP2AO43633 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms