Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.58■□□□□ 0.08
PROM1O43490 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.58■□□□□ 0.08
PROM1O43490 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.58■□□□□ 0.08
PROM1O43490 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PROM1O43490 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.58■□□□□ 0.08
PROM1O43490 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.58■□□□□ 0.08
PROM1O43490 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PROM1O43490 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.58■□□□□ 0.08
PROM1O43490 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PROM1O43490 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.58■□□□□ 0.08
PROM1O43490 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PROM1O43490 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
PROM1O43490 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.58■□□□□ 0.08
PROM1O43490 LINC02199-201ENST00000506655 2702 ntBASIC15.58■□□□□ 0.08
PROM1O43490 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
PROM1O43490 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PROM1O43490 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PROM1O43490 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 FAM58CP-201ENST00000435741 640 ntBASIC15.57■□□□□ 0.08
PROM1O43490 HMGN1P19-201ENST00000436976 333 ntBASIC15.57■□□□□ 0.08
PROM1O43490 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.57■□□□□ 0.08
PROM1O43490 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.57■□□□□ 0.08
PROM1O43490 AC055717.3-201ENST00000622967 595 ntBASIC15.57■□□□□ 0.08
PROM1O43490 C20orf181-201ENST00000623918 480 ntBASIC15.57■□□□□ 0.08
PROM1O43490 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PROM1O43490 AC092902.6-201ENST00000641783 218 ntBASIC15.57■□□□□ 0.08
PROM1O43490 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.57■□□□□ 0.08
PROM1O43490 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.57■□□□□ 0.08
PROM1O43490 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PROM1O43490 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
PROM1O43490 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.56■□□□□ 0.08
PROM1O43490 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PROM1O43490 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.56■□□□□ 0.08
PROM1O43490 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PROM1O43490 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
PROM1O43490 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.56■□□□□ 0.08
PROM1O43490 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.56■□□□□ 0.08
PROM1O43490 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.56■□□□□ 0.08
PROM1O43490 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC15.56■□□□□ 0.08
PROM1O43490 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.56■□□□□ 0.08
PROM1O43490 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.56■□□□□ 0.08
PROM1O43490 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.56■□□□□ 0.08
PROM1O43490 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PROM1O43490 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.56■□□□□ 0.08
PROM1O43490 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.56■□□□□ 0.08
PROM1O43490 MTHFR-217ENST00000641820 1569 ntBASIC15.56■□□□□ 0.08
PROM1O43490 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms