Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.49■□□□□ 0.71
FOXN1O15353 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.49■□□□□ 0.71
FOXN1O15353 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.49■□□□□ 0.71
FOXN1O15353 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
FOXN1O15353 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.49■□□□□ 0.71
FOXN1O15353 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
FOXN1O15353 PCDHA14-201ENST00000506751 2298 ntBASIC19.49■□□□□ 0.71
FOXN1O15353 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
FOXN1O15353 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
FOXN1O15353 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXN1O15353 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
FOXN1O15353 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXN1O15353 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.48■□□□□ 0.71
FOXN1O15353 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.48■□□□□ 0.71
FOXN1O15353 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC19.48■□□□□ 0.71
FOXN1O15353 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXN1O15353 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXN1O15353 AC055876.2-201ENST00000531834 546 ntBASIC19.48■□□□□ 0.71
FOXN1O15353 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 AL589739.1-201ENST00000607720 493 ntBASIC19.48■□□□□ 0.71
FOXN1O15353 AL021578.1-201ENST00000613646 709 ntBASIC19.48■□□□□ 0.71
FOXN1O15353 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC19.48■□□□□ 0.71
FOXN1O15353 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.48■□□□□ 0.71
FOXN1O15353 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
FOXN1O15353 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXN1O15353 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.48■□□□□ 0.71
FOXN1O15353 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
FOXN1O15353 AC092171.3-201ENST00000610122 2651 ntBASIC19.48■□□□□ 0.71
FOXN1O15353 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXN1O15353 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.48■□□□□ 0.71
FOXN1O15353 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
FOXN1O15353 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 AL035456.1-201ENST00000456064 1369 ntBASIC19.47■□□□□ 0.71
FOXN1O15353 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 CES3-203ENST00000543856 3178 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXN1O15353 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
FOXN1O15353 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXN1O15353 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXN1O15353 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXN1O15353 AC142381.1-201ENST00000426099 345 ntBASIC19.47■□□□□ 0.71
FOXN1O15353 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.47■□□□□ 0.71
FOXN1O15353 SPDYE18-201ENST00000510091 1050 ntBASIC19.47■□□□□ 0.71
FOXN1O15353 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.47■□□□□ 0.71
FOXN1O15353 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC19.47■□□□□ 0.71
FOXN1O15353 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 AL118508.1-201ENST00000613502 2345 ntBASIC19.47■□□□□ 0.71
FOXN1O15353 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXN1O15353 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
FOXN1O15353 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC19.47■□□□□ 0.71
FOXN1O15353 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.47■□□□□ 0.71
FOXN1O15353 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
FOXN1O15353 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN1O15353 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN1O15353 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
FOXN1O15353 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
FOXN1O15353 AL135999.2-201ENST00000622438 1686 ntBASIC19.46■□□□□ 0.71
FOXN1O15353 AC012569.1-201ENST00000591191 1524 ntBASIC19.46■□□□□ 0.71
FOXN1O15353 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN1O15353 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN1O15353 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN1O15353 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
FOXN1O15353 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
FOXN1O15353 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
FOXN1O15353 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms