Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX1O00570 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
SOX1O00570 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX1O00570 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SOX1O00570 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX1O00570 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.18■□□□□ 0.34
SOX1O00570 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX1O00570 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX1O00570 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX1O00570 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SOX1O00570 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX1O00570 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX1O00570 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX1O00570 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.18■□□□□ 0.34
SOX1O00570 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SOX1O00570 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX1O00570 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX1O00570 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX1O00570 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SOX1O00570 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX1O00570 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SOX1O00570 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SOX1O00570 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.18■□□□□ 0.34
SOX1O00570 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.18■□□□□ 0.34
SOX1O00570 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SOX1O00570 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SOX1O00570 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SOX1O00570 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.17■□□□□ 0.34
SOX1O00570 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SOX1O00570 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
SOX1O00570 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.17■□□□□ 0.34
SOX1O00570 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SOX1O00570 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.17■□□□□ 0.34
SOX1O00570 VDAC1P7-201ENST00000462417 847 ntBASIC17.17■□□□□ 0.34
SOX1O00570 TNXA-203ENST00000507684 2038 ntBASIC17.17■□□□□ 0.34
SOX1O00570 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC17.17■□□□□ 0.34
SOX1O00570 AC126915.1-201ENST00000522847 1038 ntBASIC17.17■□□□□ 0.34
SOX1O00570 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.17■□□□□ 0.34
SOX1O00570 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.17■□□□□ 0.34
SOX1O00570 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.17■□□□□ 0.34
SOX1O00570 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SOX1O00570 AC073352.2-201ENST00000609385 439 ntBASIC17.17■□□□□ 0.34
SOX1O00570 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.17■□□□□ 0.34
SOX1O00570 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SOX1O00570 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.17■□□□□ 0.34
SOX1O00570 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SOX1O00570 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SOX1O00570 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.16■□□□□ 0.34
SOX1O00570 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SOX1O00570 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.16■□□□□ 0.34
SOX1O00570 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.16■□□□□ 0.34
SOX1O00570 NKAIN1P1-201ENST00000435754 582 ntBASIC17.16■□□□□ 0.34
SOX1O00570 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SOX1O00570 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms