Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC162PA2VCL2 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 AC002056.1-201ENST00000395613 760 ntBASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 WASH6P-202ENST00000359512 1437 ntBASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 AL136379.1-201ENST00000623471 2642 ntBASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC162PA2VCL2 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 AC093724.1-201ENST00000448659 1027 ntBASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 AC112191.1-201ENST00000523689 701 ntBASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 AL161645.1-201ENST00000622716 1255 ntBASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 AL592424.1-201ENST00000563624 1536 ntBASIC16.4■□□□□ 0.22
CCDC162PA2VCL2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.39■□□□□ 0.22
CCDC162PA2VCL2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 AC040169.1-201ENST00000565382 521 ntBASIC16.39■□□□□ 0.21
CCDC162PA2VCL2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms