Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 TPO-206ENST00000382269 1155 ntTSL 5 BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 C1QBPP1-201ENST00000400117 770 ntBASIC18.74■□□□□ 0.59
SSC5DA1L4H1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 ENPP7P5-201ENST00000541031 1031 ntBASIC18.74■□□□□ 0.59
SSC5DA1L4H1 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 PCDHB18P-201ENST00000524813 2368 ntBASIC18.74■□□□□ 0.59
SSC5DA1L4H1 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSC5DA1L4H1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 AL592424.1-201ENST00000563624 1536 ntBASIC18.73■□□□□ 0.59
SSC5DA1L4H1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 HNRNPUP1-201ENST00000554987 333 ntBASIC18.73■□□□□ 0.59
SSC5DA1L4H1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SSC5DA1L4H1 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 BAATP1-201ENST00000412284 1225 ntBASIC18.72■□□□□ 0.59
SSC5DA1L4H1 GPAA1P2-201ENST00000417923 928 ntBASIC18.72■□□□□ 0.59
SSC5DA1L4H1 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 AC103810.3-201ENST00000583567 96 ntBASIC18.72■□□□□ 0.59
SSC5DA1L4H1 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 YBX1P6-201ENST00000442962 1002 ntBASIC18.72■□□□□ 0.59
SSC5DA1L4H1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 DUX4L45-201ENST00000566406 1057 ntBASIC18.72■□□□□ 0.59
SSC5DA1L4H1 ATF5-205ENST00000600336 682 ntTSL 2 BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 REXO1L8P-201ENST00000604378 1897 ntBASIC18.72■□□□□ 0.59
SSC5DA1L4H1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSC5DA1L4H1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SSC5DA1L4H1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms