Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TCRBV9S1A1TA0A576 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 AC023824.1-201ENST00000562945 2975 ntBASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 MIR1224-201ENST00000408193 85 ntBASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 HNRNPDP1-201ENST00000439535 754 ntBASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 AC012313.10-201ENST00000623509 926 ntBASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 TP73-AS1-207ENST00000624167 988 ntBASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TCRBV9S1A1TA0A576 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 AC018712.1-201ENST00000455767 687 ntBASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 MIR3909-201ENST00000579518 119 ntBASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 AL031055.1-201ENST00000606362 631 ntBASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 AC005593.1-201ENST00000624894 515 ntBASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.49■□□□□ 0.23
TCRBV9S1A1TA0A576 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.48■□□□□ 0.23
TCRBV9S1A1TA0A576 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms