Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 KRT8P37-201ENST00000451609 1420 ntBASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC007613.1-201ENST00000572811 2597 ntBASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 HAUS4P1-201ENST00000406739 1145 ntBASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 NME4-207ENST00000450036 985 ntTSL 3 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 LETM1P2-201ENST00000597330 2178 ntBASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC20.53■□□□□ 0.88
LOC102724428A0A0B4J2F2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 INTS4P2-202ENST00000614726 2019 ntBASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
LOC102724428A0A0B4J2F2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
LOC102724428A0A0B4J2F2 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms