Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 AC022494.1-201ENST00000466044 728 ntBASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCDC187A0A096LP49 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 AC234783.1-201ENST00000441761 496 ntBASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 AC022210.1-201ENST00000449856 793 ntBASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 AL589987.1-201ENST00000453380 819 ntBASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 AC007389.4-201ENST00000454674 793 ntBASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 TIMM17BP1-201ENST00000545713 516 ntBASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 AC092337.1-201ENST00000568699 1129 ntBASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 CTBP2P3-201ENST00000585629 1255 ntBASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 AC074044.1-201ENST00000609673 707 ntBASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCDC187A0A096LP49 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms