Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 AL596087.1-201ENST00000400979 1969 ntBASIC17.44■□□□□ 0.38
SIX4Q9UIU6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.44■□□□□ 0.38
SIX4Q9UIU6 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 AC092580.3-201ENST00000430932 139 ntBASIC17.43■□□□□ 0.38
SIX4Q9UIU6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 AC005498.2-205ENST00000593218 784 ntBASIC17.43■□□□□ 0.38
SIX4Q9UIU6 RN7SL828P-201ENST00000607615 303 ntBASIC17.43■□□□□ 0.38
SIX4Q9UIU6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SIX4Q9UIU6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 FO538757.1-201ENST00000623083 1397 ntBASIC17.42■□□□□ 0.38
SIX4Q9UIU6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 AL136982.4-201ENST00000437689 1740 ntBASIC17.42■□□□□ 0.38
SIX4Q9UIU6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 AC124067.4-201ENST00000519691 2379 ntBASIC17.42■□□□□ 0.38
SIX4Q9UIU6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 TREML5P-201ENST00000421694 576 ntBASIC17.42■□□□□ 0.38
SIX4Q9UIU6 AC245100.5-201ENST00000452108 331 ntBASIC17.42■□□□□ 0.38
SIX4Q9UIU6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SIX4Q9UIU6 AL035456.1-201ENST00000456064 1369 ntBASIC17.41■□□□□ 0.38
SIX4Q9UIU6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms