Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 AP005018.1-201ENST00000525475 301 ntBASIC19.59■□□□□ 0.73
SALL1Q9NSC2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 AC004233.3-201ENST00000607794 1269 ntBASIC19.59■□□□□ 0.73
SALL1Q9NSC2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SALL1Q9NSC2 ALOX12P2-203ENST00000570921 1945 ntBASIC19.59■□□□□ 0.73
SALL1Q9NSC2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 AC135586.1-201ENST00000539323 574 ntBASIC19.58■□□□□ 0.73
SALL1Q9NSC2 PAM16-215ENST00000577031 548 ntTSL 4 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 AC025048.6-201ENST00000634326 1161 ntBASIC19.58■□□□□ 0.73
SALL1Q9NSC2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
SALL1Q9NSC2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SALL1Q9NSC2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 AC044860.1-202ENST00000559481 777 ntBASIC19.57■□□□□ 0.72
SALL1Q9NSC2 AC004790.1-201ENST00000612686 536 ntBASIC19.57■□□□□ 0.72
SALL1Q9NSC2 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC19.57■□□□□ 0.72
SALL1Q9NSC2 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 AL592424.1-201ENST00000563624 1536 ntBASIC19.57■□□□□ 0.72
SALL1Q9NSC2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SALL1Q9NSC2 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
SALL1Q9NSC2 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms